Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 MFSD8-242ENST00000641690 4199 ntBASIC5.03□□□□□ -1.6
CNKSR3Q6P9H4 AC006971.1-201ENST00000407916 4486 ntBASIC5.03□□□□□ -1.6
CNKSR3Q6P9H4 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
CNKSR3Q6P9H4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.03□□□□□ -1.6
CNKSR3Q6P9H4 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 RNU4-1-201ENST00000363925 141 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 RNU1-85P-201ENST00000364127 164 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 Y_RNA.231-201ENST00000364358 102 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 SNORA22B-201ENST00000383876 138 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 SNORD116-29-201ENST00000384516 83 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 AL136116.1-201ENST00000403591 381 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 BTBD10P2-201ENST00000404779 676 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 RNU2-28P-201ENST00000410457 189 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 COX5BP7-201ENST00000414780 274 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 TMSB10P2-201ENST00000416049 131 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 ATP5JP1-201ENST00000431631 322 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 AC010683.1-201ENST00000473673 378 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 RPSAP51-201ENST00000497462 645 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 KLHL2P1-201ENST00000508691 521 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 RFPL4AP5-201ENST00000514977 504 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 RNU6-202P-201ENST00000515998 96 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 RNU6-123P-201ENST00000516163 102 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 RNU6-201P-201ENST00000517100 61 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 RNU6-1220P-201ENST00000517126 108 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 RNU6-794P-201ENST00000517261 64 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 COX6CP5-201ENST00000527162 228 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 AC026464.5-201ENST00000562497 722 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 AC008687.2-201ENST00000597865 520 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 AC010591.1-201ENST00000603941 649 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 AL355472.4-201ENST00000610233 626 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 AL023881.1-201ENST00000621088 301 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 MTND4LP32-201ENST00000636111 270 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 MTND4P14-201ENST00000435799 1354 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 AL450326.2-201ENST00000421913 1962 ntBASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CNKSR3Q6P9H4 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 XPOTP1-201ENST00000443317 2398 ntBASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 AC104118.1-201ENST00000607625 1589 ntBASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 Y_RNA.445-201ENST00000384168 102 ntBASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 MIR134-201ENST00000385258 73 ntBASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 RNU6-952P-201ENST00000391164 108 ntBASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 MRPL42P2-201ENST00000403169 426 ntBASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 AL591416.1-201ENST00000404015 867 ntBASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 AC009161.1-201ENST00000417306 376 ntBASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 AC019097.1-201ENST00000424783 735 ntBASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 RN7SL98P-201ENST00000462271 300 ntBASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 RPL21P71-201ENST00000465598 459 ntBASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 RPL21P129-201ENST00000491732 478 ntBASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 RPL38P4-201ENST00000502376 214 ntBASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms