Protein–RNA interactions for Protein: Q5VXU3

CHIC1, Cysteine-rich hydrophobic domain-containing protein 1, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHIC1Q5VXU3 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC12□□□□□ -0.49
CHIC1Q5VXU3 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHIC1Q5VXU3 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC12□□□□□ -0.49
CHIC1Q5VXU3 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC12□□□□□ -0.49
CHIC1Q5VXU3 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CHIC1Q5VXU3 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CHIC1Q5VXU3 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC12□□□□□ -0.49
CHIC1Q5VXU3 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC12□□□□□ -0.49
CHIC1Q5VXU3 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC11.99□□□□□ -0.49
CHIC1Q5VXU3 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CHIC1Q5VXU3 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CHIC1Q5VXU3 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CHIC1Q5VXU3 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CHIC1Q5VXU3 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC11.99□□□□□ -0.49
CHIC1Q5VXU3 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CHIC1Q5VXU3 Y_RNA.415-201ENST00000384012 112 ntBASIC11.99□□□□□ -0.49
CHIC1Q5VXU3 FAUP2-201ENST00000394301 401 ntBASIC11.99□□□□□ -0.49
CHIC1Q5VXU3 PPIAP23-201ENST00000420099 497 ntBASIC11.99□□□□□ -0.49
CHIC1Q5VXU3 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC11.99□□□□□ -0.49
CHIC1Q5VXU3 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC11.99□□□□□ -0.49
CHIC1Q5VXU3 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC11.99□□□□□ -0.49
CHIC1Q5VXU3 IGKV2OR2-7-201ENST00000604652 304 ntBASIC11.99□□□□□ -0.49
CHIC1Q5VXU3 AC116447.1-201ENST00000613153 453 ntBASIC11.99□□□□□ -0.49
CHIC1Q5VXU3 RN7SL126P-201ENST00000616400 299 ntBASIC11.99□□□□□ -0.49
CHIC1Q5VXU3 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CHIC1Q5VXU3 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CHIC1Q5VXU3 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CHIC1Q5VXU3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CHIC1Q5VXU3 AC068769.1-201ENST00000474767 2426 ntBASIC11.99□□□□□ -0.49
CHIC1Q5VXU3 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CHIC1Q5VXU3 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CHIC1Q5VXU3 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CHIC1Q5VXU3 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CHIC1Q5VXU3 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CHIC1Q5VXU3 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
CHIC1Q5VXU3 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CHIC1Q5VXU3 FTO-222ENST00000637969 2889 ntTSL 5 BASIC11.98□□□□□ -0.49
CHIC1Q5VXU3 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC11.98□□□□□ -0.49
CHIC1Q5VXU3 AP001541.1-201ENST00000623322 1904 ntBASIC11.98□□□□□ -0.49
CHIC1Q5VXU3 RNU6-979P-201ENST00000383896 107 ntBASIC11.98□□□□□ -0.49
CHIC1Q5VXU3 UQCRHP1-204ENST00000424609 274 ntBASIC11.98□□□□□ -0.49
CHIC1Q5VXU3 AC007919.1-201ENST00000429380 217 ntBASIC11.98□□□□□ -0.49
CHIC1Q5VXU3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC11.98□□□□□ -0.49
CHIC1Q5VXU3 RN7SL259P-201ENST00000478499 253 ntBASIC11.98□□□□□ -0.49
CHIC1Q5VXU3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC11.98□□□□□ -0.49
CHIC1Q5VXU3 RNA5SP154-201ENST00000516193 111 ntBASIC11.98□□□□□ -0.49
CHIC1Q5VXU3 RN7SKP233-201ENST00000517005 110 ntBASIC11.98□□□□□ -0.49
CHIC1Q5VXU3 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CHIC1Q5VXU3 NDUFA3P2-201ENST00000531434 232 ntBASIC11.98□□□□□ -0.49
CHIC1Q5VXU3 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC11.98□□□□□ -0.49
CHIC1Q5VXU3 MIR548AY-201ENST00000617669 107 ntBASIC11.98□□□□□ -0.49
CHIC1Q5VXU3 AC034229.6-201ENST00000623704 224 ntBASIC11.98□□□□□ -0.49
CHIC1Q5VXU3 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC11.98□□□□□ -0.49
CHIC1Q5VXU3 AC005332.9-201ENST00000620266 2921 ntBASIC11.98□□□□□ -0.49
CHIC1Q5VXU3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC11.98□□□□□ -0.49
CHIC1Q5VXU3 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CHIC1Q5VXU3 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC11.97□□□□□ -0.49
CHIC1Q5VXU3 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CHIC1Q5VXU3 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CHIC1Q5VXU3 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CHIC1Q5VXU3 RNU6-837P-201ENST00000391056 108 ntBASIC11.97□□□□□ -0.49
CHIC1Q5VXU3 AL078599.1-201ENST00000402075 293 ntBASIC11.97□□□□□ -0.49
CHIC1Q5VXU3 AC007969.2-201ENST00000441891 191 ntBASIC11.97□□□□□ -0.49
CHIC1Q5VXU3 RN7SL57P-201ENST00000493687 290 ntBASIC11.97□□□□□ -0.49
CHIC1Q5VXU3 RNA5SP518-201ENST00000515957 119 ntBASIC11.97□□□□□ -0.49
CHIC1Q5VXU3 SCARNA15.2-201ENST00000516409 127 ntBASIC11.97□□□□□ -0.49
CHIC1Q5VXU3 SNORD84-203ENST00000584275 78 ntBASIC11.97□□□□□ -0.49
CHIC1Q5VXU3 pRNA.9-201ENST00000618609 89 ntBASIC11.97□□□□□ -0.49
CHIC1Q5VXU3 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CHIC1Q5VXU3 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CHIC1Q5VXU3 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC11.97□□□□□ -0.49
CHIC1Q5VXU3 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CHIC1Q5VXU3 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CHIC1Q5VXU3 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CHIC1Q5VXU3 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CHIC1Q5VXU3 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CHIC1Q5VXU3 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CHIC1Q5VXU3 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CHIC1Q5VXU3 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CHIC1Q5VXU3 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC11.96□□□□□ -0.49
CHIC1Q5VXU3 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC11.96□□□□□ -0.49
CHIC1Q5VXU3 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC11.96□□□□□ -0.49
CHIC1Q5VXU3 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
CHIC1Q5VXU3 MIR889-201ENST00000401280 79 ntBASIC11.96□□□□□ -0.49
CHIC1Q5VXU3 MIR1278-201ENST00000408753 81 ntBASIC11.96□□□□□ -0.49
CHIC1Q5VXU3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC11.96□□□□□ -0.49
CHIC1Q5VXU3 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC11.96□□□□□ -0.49
CHIC1Q5VXU3 AC008753.1-201ENST00000423096 284 ntBASIC11.96□□□□□ -0.49
CHIC1Q5VXU3 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC11.96□□□□□ -0.49
CHIC1Q5VXU3 AC244670.1-201ENST00000436879 112 ntBASIC11.96□□□□□ -0.49
CHIC1Q5VXU3 AL772161.1-201ENST00000439130 476 ntBASIC11.96□□□□□ -0.49
CHIC1Q5VXU3 snoU13.3-201ENST00000459441 104 ntBASIC11.96□□□□□ -0.49
CHIC1Q5VXU3 MYL6P4-201ENST00000477911 453 ntBASIC11.96□□□□□ -0.49
CHIC1Q5VXU3 HMGN2P36-201ENST00000529541 409 ntBASIC11.96□□□□□ -0.49
CHIC1Q5VXU3 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC11.96□□□□□ -0.49
CHIC1Q5VXU3 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC11.96□□□□□ -0.49
CHIC1Q5VXU3 AL031846.1-201ENST00000560933 314 ntBASIC11.96□□□□□ -0.49
CHIC1Q5VXU3 PFKM-232ENST00000629846 381 ntTSL 4 BASIC11.96□□□□□ -0.49
CHIC1Q5VXU3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CHIC1Q5VXU3 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms