Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC6.26□□□□□ -1.41
PRPF38BQ5VTL8 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC6.26□□□□□ -1.41
PRPF38BQ5VTL8 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.26□□□□□ -1.41
PRPF38BQ5VTL8 AC027667.1-201ENST00000545814 304 ntBASIC6.26□□□□□ -1.41
PRPF38BQ5VTL8 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.26□□□□□ -1.41
PRPF38BQ5VTL8 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC6.26□□□□□ -1.41
PRPF38BQ5VTL8 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC6.26□□□□□ -1.41
PRPF38BQ5VTL8 AC006600.1-201ENST00000572529 153 ntBASIC6.26□□□□□ -1.41
PRPF38BQ5VTL8 HMGB1P50-201ENST00000605814 607 ntBASIC6.26□□□□□ -1.41
PRPF38BQ5VTL8 NANOGP3-201ENST00000605855 286 ntBASIC6.26□□□□□ -1.41
PRPF38BQ5VTL8 RNU6-85P-201ENST00000605989 107 ntBASIC6.26□□□□□ -1.41
PRPF38BQ5VTL8 AC098479.1-201ENST00000609225 154 ntBASIC6.26□□□□□ -1.41
PRPF38BQ5VTL8 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.26□□□□□ -1.41
PRPF38BQ5VTL8 AL137067.2-201ENST00000621202 131 ntBASIC6.26□□□□□ -1.41
PRPF38BQ5VTL8 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PRPF38BQ5VTL8 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PRPF38BQ5VTL8 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PRPF38BQ5VTL8 AL359893.1-201ENST00000447628 1580 ntBASIC6.26□□□□□ -1.41
PRPF38BQ5VTL8 AC008957.3-201ENST00000624112 2242 ntBASIC6.26□□□□□ -1.41
PRPF38BQ5VTL8 AC007114.2-201ENST00000576014 4281 ntBASIC6.26□□□□□ -1.41
PRPF38BQ5VTL8 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.26□□□□□ -1.41
PRPF38BQ5VTL8 AC093775.1-201ENST00000624154 1868 ntBASIC6.26□□□□□ -1.41
PRPF38BQ5VTL8 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 AC109446.4-201ENST00000623235 2755 ntBASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 AC112243.1-201ENST00000623949 3851 ntBASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 Y_RNA.214-201ENST00000364201 112 ntBASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 Y_RNA.276-201ENST00000364732 109 ntBASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 AL590704.1-201ENST00000402856 794 ntBASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 AP000580.1-201ENST00000404439 358 ntBASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 RNU6ATAC16P-201ENST00000408591 138 ntBASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 RPS4XP5-201ENST00000419038 768 ntBASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 ELOCP20-201ENST00000422460 345 ntBASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 RPL23AP33-201ENST00000442301 452 ntBASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 CHEK2P4-201ENST00000450340 246 ntBASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 RNU6-953P-201ENST00000459154 107 ntBASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 HIGD1AP3-201ENST00000515857 278 ntBASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 MIR4273-201ENST00000582824 84 ntBASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 AC011447.4-201ENST00000587562 111 ntBASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 AC067852.3-201ENST00000589177 561 ntBASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
PRPF38BQ5VTL8 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 MTND5P6-201ENST00000422338 1798 ntBASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 Y_RNA.48-201ENST00000362710 103 ntBASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 RNU6-989P-201ENST00000362756 107 ntBASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 Y_RNA.64-201ENST00000362845 102 ntBASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 RNY3P11-201ENST00000364153 102 ntBASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 RNU4-42P-201ENST00000364738 142 ntBASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 Y_RNA.526-201ENST00000384572 110 ntBASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 Y_RNA.551-201ENST00000384661 102 ntBASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 MIR134-201ENST00000385258 73 ntBASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 AC110754.1-201ENST00000399740 601 ntBASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 AL713922.1-201ENST00000416477 747 ntBASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 RPL7P2-201ENST00000427639 268 ntBASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 LAMTOR3P1-201ENST00000428620 370 ntBASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 AP000942.1-201ENST00000463969 747 ntBASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 HMGB1P25-201ENST00000468402 607 ntBASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 AC093852.1-201ENST00000503587 266 ntBASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 SNORA25.11-201ENST00000515935 105 ntBASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 Y_RNA.673-201ENST00000516306 88 ntBASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 RNU7-4P-201ENST00000516961 62 ntBASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 IGKV2D-23-201ENST00000518179 286 ntBASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 AP001284.1-201ENST00000528393 2118 ntBASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 AP003385.6-201ENST00000531603 374 ntBASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 RRN3P3-201ENST00000549207 578 ntBASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 AC084783.1-201ENST00000565846 910 ntBASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 MIR4429-201ENST00000580105 73 ntBASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 AC093227.2-201ENST00000589357 285 ntBASIC6.24□□□□□ -1.41
PRPF38BQ5VTL8 AC012616.1-201ENST00000600294 197 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms