Protein–RNA interactions for Protein: Q5EBN2

TRIM61, Putative tripartite motif-containing protein 61, humanhuman

Predictions only

Length 209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM61Q5EBN2 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM61Q5EBN2 NEAT1-202ENST00000501122 22743 ntBASIC4.79□□□□□ -1.64
TRIM61Q5EBN2 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM61Q5EBN2 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM61Q5EBN2 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 RNA5SP388-201ENST00000362584 119 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 Y_RNA.157-201ENST00000363638 102 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 SNORA62.1-201ENST00000364287 154 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 AL080315.1-201ENST00000406055 466 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 RNU2-36P-201ENST00000410361 191 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 RPL12P9-201ENST00000412942 488 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 SDCBPP3-201ENST00000419629 891 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 RPEP3-201ENST00000425462 676 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 RPL7AP49-201ENST00000429522 581 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 AL591438.1-201ENST00000433508 581 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 RNU7-182P-201ENST00000459009 62 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 RPS27AP1-201ENST00000475545 471 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 RN7SL817P-201ENST00000480777 288 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 AL163973.1-201ENST00000484753 577 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 RN7SL441P-201ENST00000492388 296 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 AC091951.2-201ENST00000500762 203 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 SNORD27.1-201ENST00000516319 72 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 RNU6-875P-201ENST00000516488 106 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 RNU4-60P-201ENST00000517239 135 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 OR5BN1P-201ENST00000532955 829 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 ARL2BPP2-201ENST00000550907 489 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 HMGB3P26-201ENST00000560051 582 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 NDUFB4P11-201ENST00000560510 395 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 FGF7P1-201ENST00000582820 288 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 AC011712.1-201ENST00000588959 234 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 RMST_3.1-201ENST00000611651 109 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 AC006504.8-201ENST00000621046 635 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 AC093648.1-201ENST00000623546 606 ntBASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM61Q5EBN2 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 Y_RNA.22-201ENST00000362492 102 ntBASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 Y_RNA.72-201ENST00000362894 103 ntBASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 RNU6-179P-201ENST00000363350 107 ntBASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 RNU6-1155P-201ENST00000363554 107 ntBASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 SNORA57.1-201ENST00000391227 145 ntBASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 RNA5SP397-201ENST00000391323 118 ntBASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 RPL21P67-201ENST00000402896 478 ntBASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 AL035079.1-201ENST00000405210 287 ntBASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 AL354719.1-201ENST00000406535 843 ntBASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 RN7SKP263-201ENST00000411194 309 ntBASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 RPS7P15-201ENST00000415804 584 ntBASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 AC093019.1-201ENST00000443135 252 ntBASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 AL162591.2-201ENST00000449634 317 ntBASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 MTND1P11-201ENST00000456661 876 ntBASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 AC008481.1-201ENST00000463278 396 ntBASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 OR5AL2P-201ENST00000532185 920 ntBASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 NCAPGP2-201ENST00000557911 754 ntBASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 AC233702.9-201ENST00000581528 203 ntBASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 AF038458.1-201ENST00000588406 262 ntBASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 AL035413.2-201ENST00000604801 525 ntBASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 TUG1_2.1-201ENST00000614234 87 ntBASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 AC079684.1-201ENST00000621405 437 ntBASIC4.77□□□□□ -1.65
TRIM61Q5EBN2 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms