Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 SNORD42A-201ENST00000459584 64 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 RPS4XP10-201ENST00000465034 731 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 KLF3P2-201ENST00000465138 268 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 RNU6-27P-201ENST00000516146 107 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 AL353997.4-201ENST00000586196 166 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 TPMTP1-201ENST00000592307 737 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 AC024220.1-201ENST00000603675 484 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 AC007390.2-201ENST00000606229 3803 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 AP002360.3-201ENST00000607673 710 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 AC131902.3-201ENST00000611767 581 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 AC072046.2-201ENST00000618366 268 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 OR5H6-203ENST00000642105 978 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 AC016588.2-201ENST00000632484 3021 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 PABPC1P7-201ENST00000413177 1513 ntBASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 LINC02471-203ENST00000641941 4752 ntBASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 AL161781.1-201ENST00000354277 403 ntBASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 RPS20P2-201ENST00000402520 389 ntBASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 AL356421.1-201ENST00000403255 413 ntBASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 RNA5SP44-201ENST00000410446 133 ntBASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 RNU6-248P-201ENST00000410720 107 ntBASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 Z97055.1-201ENST00000419730 712 ntBASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 MTCO2P19-201ENST00000427513 598 ntBASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 AC244505.5-201ENST00000443639 207 ntBASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 TMED11P-201ENST00000479478 690 ntBASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 RN7SKP244-201ENST00000516513 307 ntBASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 RNU6-506P-201ENST00000516553 94 ntBASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 MIR3913-1-201ENST00000577744 102 ntBASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 AC053481.4-201ENST00000583164 216 ntBASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 AC009977.1-201ENST00000586015 570 ntBASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 AL161729.3-201ENST00000603533 673 ntBASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 AC017083.3-201ENST00000609955 700 ntBASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 AC090970.3-201ENST00000612566 866 ntBASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 AC090517.2-201ENST00000614966 680 ntBASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 MIR4727-201ENST00000622232 55 ntBASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 AP006248.2-201ENST00000623309 592 ntBASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 AC091925.2-201ENST00000625059 256 ntBASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 OR5AK4P-201ENST00000635912 903 ntBASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SLC44A4Q53GD3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 ZNF33CP-201ENST00000432492 2030 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 SNORA70.4-201ENST00000365509 134 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 RNU6-1207P-201ENST00000384343 107 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 RPS3AP36-201ENST00000398190 775 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 Y_RNA.608-201ENST00000410647 95 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 RN7SKP167-201ENST00000411047 285 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 VDAC1P9-201ENST00000412766 841 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 CKS1BP5-201ENST00000434172 273 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 AL121601.2-201ENST00000438019 707 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms