Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 HMGB1P17-201ENST00000403495 628 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 HMGB1P11-201ENST00000413899 637 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 AC127526.1-201ENST00000417526 366 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 RPL7P30-201ENST00000420888 709 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 AL389915.1-201ENST00000422463 466 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 MTCO2P5-201ENST00000422621 426 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 ARPC3P5-201ENST00000448802 534 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 SSXP1-201ENST00000453640 473 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 TPT1P7-201ENST00000458300 517 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 HMGB1P25-201ENST00000468402 607 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 AC011825.1-201ENST00000484967 388 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 AC146944.2-203ENST00000502493 354 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 ARL2BPP4-201ENST00000506854 471 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 AC093824.1-201ENST00000508796 343 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 AF213884.2-201ENST00000510417 903 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 CDC42P4-201ENST00000510507 563 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 AC139495.1-202ENST00000513164 354 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 AC116347.2-201ENST00000514912 523 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 MYL12AP1-201ENST00000518490 515 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 AC083760.1-201ENST00000589621 670 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 AC107304.1-201ENST00000604229 296 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 Z99129.1-201ENST00000612510 255 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 MIR7702-201ENST00000621931 59 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 RNA5SP196-201ENST00000625967 102 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 AL049780.3-201ENST00000624612 1583 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
LONRF3Q496Y0 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.65
LONRF3Q496Y0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.71□□□□□ -1.65
LONRF3Q496Y0 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LONRF3Q496Y0 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
LONRF3Q496Y0 SPRR2C-201ENST00000290702 219 ntBASIC4.71□□□□□ -1.66
LONRF3Q496Y0 RNU6-1215P-201ENST00000384441 102 ntBASIC4.71□□□□□ -1.66
LONRF3Q496Y0 SNORD3H-201ENST00000384486 214 ntBASIC4.71□□□□□ -1.66
LONRF3Q496Y0 AL022722.2-201ENST00000402519 180 ntBASIC4.71□□□□□ -1.66
LONRF3Q496Y0 MIR1179-201ENST00000408703 91 ntBASIC4.71□□□□□ -1.66
LONRF3Q496Y0 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.71□□□□□ -1.66
LONRF3Q496Y0 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.71□□□□□ -1.66
LONRF3Q496Y0 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.71□□□□□ -1.66
LONRF3Q496Y0 SDCBPP1-201ENST00000440192 890 ntBASIC4.71□□□□□ -1.66
LONRF3Q496Y0 AL353748.1-201ENST00000440753 474 ntBASIC4.71□□□□□ -1.66
LONRF3Q496Y0 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.71□□□□□ -1.66
LONRF3Q496Y0 BX322784.1-201ENST00000455793 1077 ntBASIC4.71□□□□□ -1.66
LONRF3Q496Y0 HMGN2P16-201ENST00000456802 261 ntBASIC4.71□□□□□ -1.66
LONRF3Q496Y0 AP001992.1-205ENST00000462248 379 ntBASIC4.71□□□□□ -1.66
LONRF3Q496Y0 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.71□□□□□ -1.66
LONRF3Q496Y0 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LONRF3Q496Y0 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.71□□□□□ -1.66
LONRF3Q496Y0 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.71□□□□□ -1.66
LONRF3Q496Y0 RNU6-405P-201ENST00000516637 110 ntBASIC4.71□□□□□ -1.66
LONRF3Q496Y0 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.71□□□□□ -1.66
LONRF3Q496Y0 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.71□□□□□ -1.66
LONRF3Q496Y0 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.71□□□□□ -1.66
LONRF3Q496Y0 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.71□□□□□ -1.66
LONRF3Q496Y0 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.71□□□□□ -1.66
LONRF3Q496Y0 AC106785.1-201ENST00000565935 262 ntBASIC4.71□□□□□ -1.66
LONRF3Q496Y0 EIF1P4-201ENST00000572664 335 ntBASIC4.71□□□□□ -1.66
LONRF3Q496Y0 AC141257.3-201ENST00000572906 215 ntBASIC4.71□□□□□ -1.66
LONRF3Q496Y0 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.71□□□□□ -1.66
LONRF3Q496Y0 AL031176.1-201ENST00000604554 466 ntBASIC4.71□□□□□ -1.66
LONRF3Q496Y0 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.71□□□□□ -1.66
LONRF3Q496Y0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
LONRF3Q496Y0 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.71□□□□□ -1.66
LONRF3Q496Y0 AP001486.2-201ENST00000561652 5113 ntBASIC4.71□□□□□ -1.66
LONRF3Q496Y0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 RNU5F-6P-201ENST00000362979 116 ntBASIC4.7□□□□□ -1.66
LONRF3Q496Y0 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 RNU6-1074P-201ENST00000383995 104 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms