Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 RPL21P8-201ENST00000465083 535 ntBASIC6.17□□□□□ -1.42
CTC1Q2NKJ3 AC087884.1-201ENST00000469738 328 ntBASIC6.17□□□□□ -1.42
CTC1Q2NKJ3 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.17□□□□□ -1.42
CTC1Q2NKJ3 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC6.17□□□□□ -1.42
CTC1Q2NKJ3 AC016559.2-201ENST00000510759 359 ntBASIC6.17□□□□□ -1.42
CTC1Q2NKJ3 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.17□□□□□ -1.42
CTC1Q2NKJ3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC6.17□□□□□ -1.42
CTC1Q2NKJ3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC6.17□□□□□ -1.42
CTC1Q2NKJ3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC6.17□□□□□ -1.42
CTC1Q2NKJ3 AC096996.1-201ENST00000563813 325 ntBASIC6.17□□□□□ -1.42
CTC1Q2NKJ3 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.17□□□□□ -1.42
CTC1Q2NKJ3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC6.17□□□□□ -1.42
CTC1Q2NKJ3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC6.17□□□□□ -1.42
CTC1Q2NKJ3 AC093671.1-201ENST00000624981 2929 ntBASIC6.17□□□□□ -1.42
CTC1Q2NKJ3 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.17□□□□□ -1.42
CTC1Q2NKJ3 PWAR1-201ENST00000624188 2414 ntBASIC6.17□□□□□ -1.42
CTC1Q2NKJ3 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CTC1Q2NKJ3 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CTC1Q2NKJ3 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CTC1Q2NKJ3 AC016745.2-201ENST00000608834 3443 ntBASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 RNA5SP234-201ENST00000363916 119 ntBASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 Y_RNA.497-201ENST00000384447 98 ntBASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 SYF2P2-201ENST00000417620 583 ntBASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 RPL36AP13-201ENST00000457490 317 ntBASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 RPS21P4-201ENST00000487122 248 ntBASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 RNU2-10P-201ENST00000516375 211 ntBASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 SOD1P3-201ENST00000518682 454 ntBASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 AC136777.2-201ENST00000522979 358 ntBASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 MIR4260-201ENST00000583107 67 ntBASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 DLEU2_2.2-201ENST00000615474 90 ntBASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 AL590240.4-201ENST00000616908 390 ntBASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.16□□□□□ -1.42
CTC1Q2NKJ3 AC011460.1-201ENST00000636268 1834 ntBASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 AC138907.8-201ENST00000623981 2256 ntBASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 HSPA8P18-201ENST00000439846 1928 ntBASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 RNU6-511P-201ENST00000363496 107 ntBASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 RNU6-188P-201ENST00000364207 107 ntBASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 RNA5SP131-201ENST00000365452 119 ntBASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 MIR517A-201ENST00000385001 87 ntBASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 SNORD70.1-201ENST00000391007 85 ntBASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 AL080315.1-201ENST00000406055 466 ntBASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 Y_RNA.597-201ENST00000410463 100 ntBASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 Y_RNA.626-201ENST00000411288 95 ntBASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 FAR2P4-202ENST00000425399 584 ntBASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 RPL23AP69-201ENST00000431134 458 ntBASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 RPL37P1-201ENST00000432310 284 ntBASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 AL353597.2-202ENST00000434901 373 ntBASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 KRT8P51-201ENST00000438938 274 ntBASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 AC087385.1-201ENST00000475062 312 ntBASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 AC009120.1-201ENST00000493458 473 ntBASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 AC072052.1-201ENST00000496556 306 ntBASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 AC068305.1-201ENST00000497406 726 ntBASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 AC012339.2-201ENST00000523996 453 ntBASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 AC025423.5-201ENST00000550230 219 ntBASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 MIR1244-1-201ENST00000612829 85 ntBASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 MIR1244-3-201ENST00000635744 85 ntBASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 MIR1244-2-201ENST00000636449 85 ntBASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 MIR1244-4-202ENST00000636813 85 ntBASIC6.15□□□□□ -1.42
CTC1Q2NKJ3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CTC1Q2NKJ3 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.15□□□□□ -1.43
CTC1Q2NKJ3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CTC1Q2NKJ3 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
CTC1Q2NKJ3 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 AC007938.2-201ENST00000604666 2634 ntBASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms