Protein–RNA interactions for Protein: Q12950

FOXD4, Forkhead box protein D4, humanhuman

Predicted RBP Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4Q12950 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.07□□□□□ -1.76
FOXD4Q12950 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXD4Q12950 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXD4Q12950 RPL21P132-201ENST00000331267 462 ntBASIC4.07□□□□□ -1.76
FOXD4Q12950 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
FOXD4Q12950 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
FOXD4Q12950 RNA5SP397-201ENST00000391323 118 ntBASIC4.07□□□□□ -1.76
FOXD4Q12950 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.07□□□□□ -1.76
FOXD4Q12950 UQCRBP1-201ENST00000421129 336 ntBASIC4.07□□□□□ -1.76
FOXD4Q12950 RAD23BP1-201ENST00000421404 1227 ntBASIC4.07□□□□□ -1.76
FOXD4Q12950 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.07□□□□□ -1.76
FOXD4Q12950 DPPA2P1-201ENST00000428060 556 ntBASIC4.07□□□□□ -1.76
FOXD4Q12950 AL162591.2-201ENST00000449634 317 ntBASIC4.07□□□□□ -1.76
FOXD4Q12950 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.07□□□□□ -1.76
FOXD4Q12950 RPS27AP8-201ENST00000452665 445 ntBASIC4.07□□□□□ -1.76
FOXD4Q12950 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.07□□□□□ -1.76
FOXD4Q12950 RPL30P9-201ENST00000465586 330 ntBASIC4.07□□□□□ -1.76
FOXD4Q12950 RPL35AP15-201ENST00000468042 339 ntBASIC4.07□□□□□ -1.76
FOXD4Q12950 AC104472.2-201ENST00000469035 601 ntBASIC4.07□□□□□ -1.76
FOXD4Q12950 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.07□□□□□ -1.76
FOXD4Q12950 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
FOXD4Q12950 TXNP6-201ENST00000510190 310 ntBASIC4.07□□□□□ -1.76
FOXD4Q12950 AC010486.3-201ENST00000511602 785 ntBASIC4.07□□□□□ -1.76
FOXD4Q12950 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
FOXD4Q12950 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
FOXD4Q12950 AC093677.1-201ENST00000514414 678 ntBASIC4.07□□□□□ -1.76
FOXD4Q12950 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.07□□□□□ -1.76
FOXD4Q12950 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.07□□□□□ -1.76
FOXD4Q12950 AP001781.1-201ENST00000530977 207 ntBASIC4.07□□□□□ -1.76
FOXD4Q12950 OR7K1P-201ENST00000546439 926 ntBASIC4.07□□□□□ -1.76
FOXD4Q12950 ISCA1P3-201ENST00000577104 373 ntBASIC4.07□□□□□ -1.76
FOXD4Q12950 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.07□□□□□ -1.76
FOXD4Q12950 AC069061.3-201ENST00000582254 823 ntBASIC4.07□□□□□ -1.76
FOXD4Q12950 MIR3609-201ENST00000582661 80 ntBASIC4.07□□□□□ -1.76
FOXD4Q12950 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXD4Q12950 MIR3138-201ENST00000585238 82 ntBASIC4.07□□□□□ -1.76
FOXD4Q12950 AC008759.1-201ENST00000589783 983 ntBASIC4.07□□□□□ -1.76
FOXD4Q12950 AC020914.6-201ENST00000594327 272 ntBASIC4.07□□□□□ -1.76
FOXD4Q12950 BPIFA4P-203ENST00000603168 689 ntBASIC4.07□□□□□ -1.76
FOXD4Q12950 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.07□□□□□ -1.76
FOXD4Q12950 ARF4P1-201ENST00000605447 541 ntBASIC4.07□□□□□ -1.76
FOXD4Q12950 OR2AS2P-201ENST00000606902 342 ntBASIC4.07□□□□□ -1.76
FOXD4Q12950 AC004908.3-201ENST00000610248 625 ntBASIC4.07□□□□□ -1.76
FOXD4Q12950 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.07□□□□□ -1.76
FOXD4Q12950 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
FOXD4Q12950 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
FOXD4Q12950 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXD4Q12950 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXD4Q12950 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.06□□□□□ -1.76
FOXD4Q12950 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
FOXD4Q12950 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
FOXD4Q12950 RNA5SP52-201ENST00000362448 134 ntBASIC4.06□□□□□ -1.76
FOXD4Q12950 RNU6-799P-201ENST00000363567 107 ntBASIC4.06□□□□□ -1.76
FOXD4Q12950 RNU6-553P-201ENST00000364047 96 ntBASIC4.06□□□□□ -1.76
FOXD4Q12950 SNORD74.4-201ENST00000364129 80 ntBASIC4.06□□□□□ -1.76
FOXD4Q12950 RNA5SP139-201ENST00000364340 117 ntBASIC4.06□□□□□ -1.76
FOXD4Q12950 MIR670-201ENST00000390142 98 ntBASIC4.06□□□□□ -1.76
FOXD4Q12950 RNU6-1197P-201ENST00000391183 107 ntBASIC4.06□□□□□ -1.76
FOXD4Q12950 AL021407.1-201ENST00000404531 386 ntBASIC4.06□□□□□ -1.76
FOXD4Q12950 MIR1302-8-201ENST00000408342 128 ntBASIC4.06□□□□□ -1.76
FOXD4Q12950 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXD4Q12950 BX842559.1-201ENST00000419615 532 ntBASIC4.06□□□□□ -1.76
FOXD4Q12950 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.06□□□□□ -1.76
FOXD4Q12950 HLA-N-201ENST00000437516 135 ntBASIC4.06□□□□□ -1.76
FOXD4Q12950 LSM1P1-201ENST00000438629 273 ntBASIC4.06□□□□□ -1.76
FOXD4Q12950 TXNP1-201ENST00000441872 371 ntBASIC4.06□□□□□ -1.76
FOXD4Q12950 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
FOXD4Q12950 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.06□□□□□ -1.76
FOXD4Q12950 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.06□□□□□ -1.76
FOXD4Q12950 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.06□□□□□ -1.76
FOXD4Q12950 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.06□□□□□ -1.76
FOXD4Q12950 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.06□□□□□ -1.76
FOXD4Q12950 AC079804.1-201ENST00000461922 436 ntBASIC4.06□□□□□ -1.76
FOXD4Q12950 RPL21P126-201ENST00000470049 478 ntBASIC4.06□□□□□ -1.76
FOXD4Q12950 RPS26P28-201ENST00000470806 348 ntBASIC4.06□□□□□ -1.76
FOXD4Q12950 AP002812.1-201ENST00000495378 474 ntBASIC4.06□□□□□ -1.76
FOXD4Q12950 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXD4Q12950 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXD4Q12950 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.06□□□□□ -1.76
FOXD4Q12950 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.06□□□□□ -1.76
FOXD4Q12950 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.06□□□□□ -1.76
FOXD4Q12950 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.06□□□□□ -1.76
FOXD4Q12950 SNORA31.9-201ENST00000516429 84 ntBASIC4.06□□□□□ -1.76
FOXD4Q12950 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
FOXD4Q12950 AC008489.1-201ENST00000524271 483 ntBASIC4.06□□□□□ -1.76
FOXD4Q12950 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXD4Q12950 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.06□□□□□ -1.76
FOXD4Q12950 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.06□□□□□ -1.76
FOXD4Q12950 MIR3915-201ENST00000578518 97 ntBASIC4.06□□□□□ -1.76
FOXD4Q12950 OR4K8P-201ENST00000578842 1048 ntBASIC4.06□□□□□ -1.76
FOXD4Q12950 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.06□□□□□ -1.76
FOXD4Q12950 AC092354.2-201ENST00000607786 514 ntBASIC4.06□□□□□ -1.76
FOXD4Q12950 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
FOXD4Q12950 AC002550.2-201ENST00000621246 394 ntBASIC4.06□□□□□ -1.76
FOXD4Q12950 AL159972.1-201ENST00000625150 448 ntBASIC4.06□□□□□ -1.76
FOXD4Q12950 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXD4Q12950 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.06□□□□□ -1.76
FOXD4Q12950 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.06□□□□□ -1.76
FOXD4Q12950 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
FOXD4Q12950 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms