Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RPS3AP9-201ENST00000417027 792 ntBASIC1.49□□□□□ -2.17
PRKDCP78527 CACYBPP1-201ENST00000438592 684 ntBASIC1.49□□□□□ -2.17
PRKDCP78527 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.49□□□□□ -2.17
PRKDCP78527 MTAPP1-201ENST00000489154 819 ntBASIC1.49□□□□□ -2.17
PRKDCP78527 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC1.49□□□□□ -2.17
PRKDCP78527 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
PRKDCP78527 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1.49□□□□□ -2.17
PRKDCP78527 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
PRKDCP78527 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.49□□□□□ -2.17
PRKDCP78527 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
PRKDCP78527 HSPD1P16-201ENST00000402302 394 ntBASIC1.49□□□□□ -2.17
PRKDCP78527 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.49□□□□□ -2.17
PRKDCP78527 MTND2P29-201ENST00000438595 412 ntBASIC1.49□□□□□ -2.17
PRKDCP78527 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.49□□□□□ -2.17
PRKDCP78527 PPP1R2P5-201ENST00000457256 603 ntBASIC1.49□□□□□ -2.17
PRKDCP78527 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.49□□□□□ -2.17
PRKDCP78527 AL451049.1-201ENST00000608672 497 ntBASIC1.49□□□□□ -2.17
PRKDCP78527 AC091834.1-201ENST00000614543 472 ntBASIC1.49□□□□□ -2.17
PRKDCP78527 OR1S1-201ENST00000624470 978 ntBASIC1.49□□□□□ -2.17
PRKDCP78527 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
PRKDCP78527 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
PRKDCP78527 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
PRKDCP78527 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
PRKDCP78527 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.49□□□□□ -2.17
PRKDCP78527 RPS24P8-201ENST00000431490 402 ntBASIC1.49□□□□□ -2.17
PRKDCP78527 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.49□□□□□ -2.17
PRKDCP78527 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC1.49□□□□□ -2.17
PRKDCP78527 AL354943.1-201ENST00000572103 781 ntBASIC1.49□□□□□ -2.17
PRKDCP78527 AC131238.1-201ENST00000617135 328 ntBASIC1.49□□□□□ -2.17
PRKDCP78527 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.49□□□□□ -2.17
PRKDCP78527 AC093909.5-201ENST00000621839 1799 ntBASIC1.49□□□□□ -2.17
PRKDCP78527 SNORA79B-201ENST00000410557 148 ntBASIC1.48□□□□□ -2.17
PRKDCP78527 RN7SL297P-201ENST00000483161 293 ntBASIC1.48□□□□□ -2.17
PRKDCP78527 HIGD1AP10-201ENST00000527837 282 ntBASIC1.48□□□□□ -2.17
PRKDCP78527 AC008015.1-201ENST00000555505 465 ntBASIC1.48□□□□□ -2.17
PRKDCP78527 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC1.48□□□□□ -2.17
PRKDCP78527 AC116158.1-201ENST00000560231 2129 ntBASIC1.48□□□□□ -2.17
PRKDCP78527 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
PRKDCP78527 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
PRKDCP78527 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
PRKDCP78527 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC1.48□□□□□ -2.17
PRKDCP78527 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC1.48□□□□□ -2.17
PRKDCP78527 AL358075.3-201ENST00000426289 226 ntBASIC1.48□□□□□ -2.17
PRKDCP78527 AC055876.1-202ENST00000567053 138 ntBASIC1.48□□□□□ -2.17
PRKDCP78527 AC009831.4-201ENST00000620744 325 ntBASIC1.48□□□□□ -2.17
PRKDCP78527 CYP3A51P-201ENST00000633513 256 ntBASIC1.48□□□□□ -2.17
PRKDCP78527 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.48□□□□□ -2.17
PRKDCP78527 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
PRKDCP78527 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
PRKDCP78527 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
PRKDCP78527 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
PRKDCP78527 RNU4-74P-201ENST00000411280 161 ntBASIC1.48□□□□□ -2.17
PRKDCP78527 YWHAZP7-201ENST00000436906 631 ntBASIC1.48□□□□□ -2.17
PRKDCP78527 HSPE1P28-201ENST00000443139 211 ntBASIC1.48□□□□□ -2.17
PRKDCP78527 RPL36AP33-201ENST00000450395 310 ntBASIC1.48□□□□□ -2.17
PRKDCP78527 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC1.48□□□□□ -2.17
PRKDCP78527 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC1.48□□□□□ -2.17
PRKDCP78527 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC1.48□□□□□ -2.17
PRKDCP78527 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
PRKDCP78527 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
PRKDCP78527 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
PRKDCP78527 AC009237.8-201ENST00000445492 379 ntBASIC1.47□□□□□ -2.17
PRKDCP78527 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.47□□□□□ -2.17
PRKDCP78527 AP003467.2-201ENST00000520175 319 ntBASIC1.47□□□□□ -2.17
PRKDCP78527 HMGB1P1-201ENST00000522557 636 ntBASIC1.47□□□□□ -2.17
PRKDCP78527 MIR3186-201ENST00000577404 85 ntBASIC1.47□□□□□ -2.17
PRKDCP78527 BMS1P7-201ENST00000602440 1052 ntBASIC1.47□□□□□ -2.17
PRKDCP78527 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC1.47□□□□□ -2.17
PRKDCP78527 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
PRKDCP78527 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
PRKDCP78527 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC1.47□□□□□ -2.17
PRKDCP78527 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.47□□□□□ -2.17
PRKDCP78527 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
PRKDCP78527 TMEM161BP1-201ENST00000457388 1457 ntBASIC1.47□□□□□ -2.17
PRKDCP78527 MIR1183-201ENST00000408856 89 ntBASIC1.47□□□□□ -2.17
PRKDCP78527 AC110588.1-201ENST00000559699 137 ntBASIC1.47□□□□□ -2.17
PRKDCP78527 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.47□□□□□ -2.17
PRKDCP78527 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.47□□□□□ -2.17
PRKDCP78527 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC1.47□□□□□ -2.17
PRKDCP78527 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
PRKDCP78527 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
PRKDCP78527 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.47□□□□□ -2.17
PRKDCP78527 ERHP2-201ENST00000402323 299 ntBASIC1.47□□□□□ -2.17
PRKDCP78527 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.47□□□□□ -2.17
PRKDCP78527 AL445669.2-201ENST00000454425 421 ntBASIC1.47□□□□□ -2.17
PRKDCP78527 RNU6-250P-201ENST00000516958 103 ntBASIC1.47□□□□□ -2.17
PRKDCP78527 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC1.47□□□□□ -2.17
PRKDCP78527 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC1.47□□□□□ -2.17
PRKDCP78527 AC092650.2-201ENST00000619984 902 ntBASIC1.47□□□□□ -2.17
PRKDCP78527 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
PRKDCP78527 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
PRKDCP78527 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
PRKDCP78527 AL391987.6-201ENST00000305671 199 ntBASIC1.47□□□□□ -2.17
PRKDCP78527 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC1.47□□□□□ -2.17
PRKDCP78527 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.47□□□□□ -2.17
PRKDCP78527 AC073136.2-201ENST00000417282 849 ntBASIC1.47□□□□□ -2.17
PRKDCP78527 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.47□□□□□ -2.17
PRKDCP78527 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.47□□□□□ -2.17
PRKDCP78527 MIR8081-201ENST00000611533 95 ntBASIC1.47□□□□□ -2.17
PRKDCP78527 MIR6515-201ENST00000619843 57 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms