Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
GTF2A1P52655 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
GTF2A1P52655 AC011460.1-201ENST00000636268 1834 ntBASIC2.36□□□□□ -2.03
GTF2A1P52655 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
GTF2A1P52655 RNA5SP374-201ENST00000362939 125 ntBASIC2.36□□□□□ -2.03
GTF2A1P52655 SNORA46.1-201ENST00000391069 153 ntBASIC2.36□□□□□ -2.03
GTF2A1P52655 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
GTF2A1P52655 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.36□□□□□ -2.03
GTF2A1P52655 AL592148.1-201ENST00000413568 445 ntBASIC2.36□□□□□ -2.03
GTF2A1P52655 LINC01881-201ENST00000416103 412 ntBASIC2.36□□□□□ -2.03
GTF2A1P52655 BTF3P9-201ENST00000418784 283 ntBASIC2.36□□□□□ -2.03
GTF2A1P52655 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.36□□□□□ -2.03
GTF2A1P52655 UBE2V1P1-201ENST00000430836 445 ntBASIC2.36□□□□□ -2.03
GTF2A1P52655 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.36□□□□□ -2.03
GTF2A1P52655 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.36□□□□□ -2.03
GTF2A1P52655 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.36□□□□□ -2.03
GTF2A1P52655 AL157827.1-201ENST00000447622 132 ntBASIC2.36□□□□□ -2.03
GTF2A1P52655 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.36□□□□□ -2.03
GTF2A1P52655 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.36□□□□□ -2.03
GTF2A1P52655 AC090453.1-201ENST00000495560 436 ntBASIC2.36□□□□□ -2.03
GTF2A1P52655 AC021146.7-201ENST00000509604 775 ntBASIC2.36□□□□□ -2.03
GTF2A1P52655 HMGB1P46-201ENST00000520062 610 ntBASIC2.36□□□□□ -2.03
GTF2A1P52655 H3F3AP1-201ENST00000559984 334 ntBASIC2.36□□□□□ -2.03
GTF2A1P52655 MTCO1P40-201ENST00000574371 625 ntBASIC2.36□□□□□ -2.03
GTF2A1P52655 ZNF92P3-201ENST00000596594 954 ntBASIC2.36□□□□□ -2.03
GTF2A1P52655 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.36□□□□□ -2.03
GTF2A1P52655 AC095031.1-201ENST00000623685 672 ntBASIC2.36□□□□□ -2.03
GTF2A1P52655 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
GTF2A1P52655 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
GTF2A1P52655 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
GTF2A1P52655 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.35□□□□□ -2.03
GTF2A1P52655 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
GTF2A1P52655 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
GTF2A1P52655 FAT1P1-201ENST00000406588 507 ntBASIC2.35□□□□□ -2.03
GTF2A1P52655 SNORA11C-201ENST00000408532 129 ntBASIC2.35□□□□□ -2.03
GTF2A1P52655 RPS3AP25-201ENST00000411660 793 ntBASIC2.35□□□□□ -2.03
GTF2A1P52655 OR4K11P-201ENST00000431829 904 ntBASIC2.35□□□□□ -2.03
GTF2A1P52655 ARL4AP4-201ENST00000434170 518 ntBASIC2.35□□□□□ -2.03
GTF2A1P52655 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.35□□□□□ -2.03
GTF2A1P52655 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.35□□□□□ -2.03
GTF2A1P52655 AC008280.2-201ENST00000455473 307 ntBASIC2.35□□□□□ -2.03
GTF2A1P52655 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.35□□□□□ -2.03
GTF2A1P52655 AC113398.2-201ENST00000507630 558 ntBASIC2.35□□□□□ -2.03
GTF2A1P52655 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.35□□□□□ -2.03
GTF2A1P52655 AC034159.1-201ENST00000513885 583 ntBASIC2.35□□□□□ -2.03
GTF2A1P52655 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.35□□□□□ -2.03
GTF2A1P52655 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.35□□□□□ -2.03
GTF2A1P52655 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.35□□□□□ -2.03
GTF2A1P52655 AL121603.1-201ENST00000553815 142 ntBASIC2.35□□□□□ -2.03
GTF2A1P52655 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.35□□□□□ -2.03
GTF2A1P52655 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.35□□□□□ -2.03
GTF2A1P52655 AL009028.1-201ENST00000604895 802 ntBASIC2.35□□□□□ -2.03
GTF2A1P52655 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.35□□□□□ -2.03
GTF2A1P52655 U6.48-201ENST00000618523 106 ntBASIC2.35□□□□□ -2.03
GTF2A1P52655 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
GTF2A1P52655 AC097714.1-201ENST00000511272 1647 ntBASIC2.35□□□□□ -2.03
GTF2A1P52655 AC080100.1-201ENST00000624239 5356 ntBASIC2.34□□□□□ -2.03
GTF2A1P52655 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.34□□□□□ -2.03
GTF2A1P52655 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
GTF2A1P52655 SNORA18.3-201ENST00000384122 132 ntBASIC2.34□□□□□ -2.03
GTF2A1P52655 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.34□□□□□ -2.03
GTF2A1P52655 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.34□□□□□ -2.03
GTF2A1P52655 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
GTF2A1P52655 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.34□□□□□ -2.03
GTF2A1P52655 MTCO3P4-201ENST00000419236 787 ntBASIC2.34□□□□□ -2.03
GTF2A1P52655 HMGB1P5-202ENST00000451497 985 ntBASIC2.34□□□□□ -2.03
GTF2A1P52655 PRSS3P4-201ENST00000453323 162 ntBASIC2.34□□□□□ -2.03
GTF2A1P52655 RN7SL807P-201ENST00000470923 297 ntBASIC2.34□□□□□ -2.03
GTF2A1P52655 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
GTF2A1P52655 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.34□□□□□ -2.03
GTF2A1P52655 RNU4-18P-201ENST00000516751 149 ntBASIC2.34□□□□□ -2.03
GTF2A1P52655 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.34□□□□□ -2.03
GTF2A1P52655 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.34□□□□□ -2.03
GTF2A1P52655 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.34□□□□□ -2.03
GTF2A1P52655 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.34□□□□□ -2.03
GTF2A1P52655 AC007954.1-201ENST00000554198 494 ntBASIC2.34□□□□□ -2.03
GTF2A1P52655 AL121594.4-201ENST00000556211 1196 ntBASIC2.34□□□□□ -2.03
GTF2A1P52655 CYCSP39-201ENST00000565821 309 ntBASIC2.34□□□□□ -2.03
GTF2A1P52655 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.34□□□□□ -2.03
GTF2A1P52655 YPEL5P2-201ENST00000605553 359 ntBASIC2.34□□□□□ -2.03
GTF2A1P52655 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.34□□□□□ -2.03
GTF2A1P52655 CRYM-AS1-204ENST00000637983 556 ntBASIC2.34□□□□□ -2.03
GTF2A1P52655 MTND4P31-201ENST00000425607 1343 ntBASIC2.34□□□□□ -2.04
GTF2A1P52655 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
GTF2A1P52655 AL354685.2-201ENST00000448218 1447 ntBASIC2.34□□□□□ -2.04
GTF2A1P52655 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.33□□□□□ -2.04
GTF2A1P52655 AC069528.2-201ENST00000624849 1991 ntBASIC2.33□□□□□ -2.04
GTF2A1P52655 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
GTF2A1P52655 MIR422A-201ENST00000362286 90 ntBASIC2.33□□□□□ -2.04
GTF2A1P52655 RNU1-85P-201ENST00000364127 164 ntBASIC2.33□□□□□ -2.04
GTF2A1P52655 RNU1-112P-201ENST00000364401 164 ntBASIC2.33□□□□□ -2.04
GTF2A1P52655 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
GTF2A1P52655 SNORA11B-201ENST00000408175 129 ntBASIC2.33□□□□□ -2.04
GTF2A1P52655 USP9YP20-201ENST00000419224 558 ntBASIC2.33□□□□□ -2.04
GTF2A1P52655 AL445687.1-201ENST00000439946 251 ntBASIC2.33□□□□□ -2.04
GTF2A1P52655 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.33□□□□□ -2.04
GTF2A1P52655 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.33□□□□□ -2.04
GTF2A1P52655 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.33□□□□□ -2.04
GTF2A1P52655 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.33□□□□□ -2.04
GTF2A1P52655 AC104629.2-201ENST00000468627 598 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms