Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.58□□□□□ -1.84
APOBEC1P41238 AL031176.1-201ENST00000604554 466 ntBASIC3.58□□□□□ -1.84
APOBEC1P41238 AC091167.4-201ENST00000605079 184 ntBASIC3.58□□□□□ -1.84
APOBEC1P41238 AL356585.4-201ENST00000623078 1229 ntBASIC3.58□□□□□ -1.84
APOBEC1P41238 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.58□□□□□ -1.84
APOBEC1P41238 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBEC1P41238 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
APOBEC1P41238 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
APOBEC1P41238 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBEC1P41238 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBEC1P41238 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.58□□□□□ -1.84
APOBEC1P41238 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
APOBEC1P41238 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
APOBEC1P41238 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBEC1P41238 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.57□□□□□ -1.84
APOBEC1P41238 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.57□□□□□ -1.84
APOBEC1P41238 Y_RNA.194-201ENST00000363985 102 ntBASIC3.57□□□□□ -1.84
APOBEC1P41238 RNU1-13P-201ENST00000384499 162 ntBASIC3.57□□□□□ -1.84
APOBEC1P41238 U3.20-201ENST00000390909 217 ntBASIC3.57□□□□□ -1.84
APOBEC1P41238 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
APOBEC1P41238 Y_RNA.598-201ENST00000410480 95 ntBASIC3.57□□□□□ -1.84
APOBEC1P41238 RNU6-712P-201ENST00000410558 100 ntBASIC3.57□□□□□ -1.84
APOBEC1P41238 RN7SKP177-201ENST00000410567 355 ntBASIC3.57□□□□□ -1.84
APOBEC1P41238 RNU2-47P-201ENST00000410649 186 ntBASIC3.57□□□□□ -1.84
APOBEC1P41238 AL359704.1-201ENST00000411586 781 ntBASIC3.57□□□□□ -1.84
APOBEC1P41238 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.57□□□□□ -1.84
APOBEC1P41238 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.57□□□□□ -1.84
APOBEC1P41238 RPL21P32-201ENST00000419877 477 ntBASIC3.57□□□□□ -1.84
APOBEC1P41238 AC244098.2-201ENST00000422068 99 ntBASIC3.57□□□□□ -1.84
APOBEC1P41238 AL356583.2-201ENST00000426536 280 ntBASIC3.57□□□□□ -1.84
APOBEC1P41238 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.57□□□□□ -1.84
APOBEC1P41238 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.57□□□□□ -1.84
APOBEC1P41238 MTCO3P5-201ENST00000433620 714 ntBASIC3.57□□□□□ -1.84
APOBEC1P41238 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.57□□□□□ -1.84
APOBEC1P41238 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
APOBEC1P41238 AC112653.1-201ENST00000443851 386 ntBASIC3.57□□□□□ -1.84
APOBEC1P41238 AL592447.1-201ENST00000447592 540 ntBASIC3.57□□□□□ -1.84
APOBEC1P41238 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.57□□□□□ -1.84
APOBEC1P41238 AL590365.1-201ENST00000450788 243 ntBASIC3.57□□□□□ -1.84
APOBEC1P41238 AC098824.1-201ENST00000453565 980 ntBASIC3.57□□□□□ -1.84
APOBEC1P41238 SSXP1-201ENST00000453640 473 ntBASIC3.57□□□□□ -1.84
APOBEC1P41238 Z82190.1-201ENST00000454534 490 ntBASIC3.57□□□□□ -1.84
APOBEC1P41238 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.57□□□□□ -1.84
APOBEC1P41238 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.57□□□□□ -1.84
APOBEC1P41238 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
APOBEC1P41238 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.57□□□□□ -1.84
APOBEC1P41238 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.57□□□□□ -1.84
APOBEC1P41238 AC108064.1-201ENST00000513791 460 ntBASIC3.57□□□□□ -1.84
APOBEC1P41238 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.57□□□□□ -1.84
APOBEC1P41238 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.57□□□□□ -1.84
APOBEC1P41238 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.57□□□□□ -1.84
APOBEC1P41238 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.57□□□□□ -1.84
APOBEC1P41238 CR383656.7-201ENST00000548164 174 ntBASIC3.57□□□□□ -1.84
APOBEC1P41238 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.57□□□□□ -1.84
APOBEC1P41238 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.57□□□□□ -1.84
APOBEC1P41238 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.57□□□□□ -1.84
APOBEC1P41238 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.57□□□□□ -1.84
APOBEC1P41238 AC103987.3-201ENST00000582071 292 ntBASIC3.57□□□□□ -1.84
APOBEC1P41238 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.57□□□□□ -1.84
APOBEC1P41238 AC011451.2-201ENST00000604303 598 ntBASIC3.57□□□□□ -1.84
APOBEC1P41238 HMGB1P50-201ENST00000605814 607 ntBASIC3.57□□□□□ -1.84
APOBEC1P41238 AC002550.2-201ENST00000621246 394 ntBASIC3.57□□□□□ -1.84
APOBEC1P41238 AC079597.1-201ENST00000624306 508 ntBASIC3.57□□□□□ -1.84
APOBEC1P41238 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.57□□□□□ -1.84
APOBEC1P41238 UBE3AP2-201ENST00000429033 2259 ntBASIC3.56□□□□□ -1.84
APOBEC1P41238 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
APOBEC1P41238 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.56□□□□□ -1.84
APOBEC1P41238 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
APOBEC1P41238 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
APOBEC1P41238 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.56□□□□□ -1.84
APOBEC1P41238 SPRR2C-201ENST00000290702 219 ntBASIC3.56□□□□□ -1.84
APOBEC1P41238 RNA5SP502-201ENST00000362694 119 ntBASIC3.56□□□□□ -1.84
APOBEC1P41238 RN7SKP44-201ENST00000363602 316 ntBASIC3.56□□□□□ -1.84
APOBEC1P41238 RNA5SP97-201ENST00000365006 84 ntBASIC3.56□□□□□ -1.84
APOBEC1P41238 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
APOBEC1P41238 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
APOBEC1P41238 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
APOBEC1P41238 AL603766.1-201ENST00000407763 664 ntBASIC3.56□□□□□ -1.84
APOBEC1P41238 RN7SKP56-201ENST00000410513 331 ntBASIC3.56□□□□□ -1.84
APOBEC1P41238 RPS7P15-201ENST00000415804 584 ntBASIC3.56□□□□□ -1.84
APOBEC1P41238 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
APOBEC1P41238 RAC1P3-201ENST00000416129 580 ntBASIC3.56□□□□□ -1.84
APOBEC1P41238 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.56□□□□□ -1.84
APOBEC1P41238 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.56□□□□□ -1.84
APOBEC1P41238 RPL22P17-201ENST00000438729 315 ntBASIC3.56□□□□□ -1.84
APOBEC1P41238 USP9YP29-201ENST00000445112 563 ntBASIC3.56□□□□□ -1.84
APOBEC1P41238 AL162151.2-201ENST00000448875 158 ntBASIC3.56□□□□□ -1.84
APOBEC1P41238 PDSS1P2-201ENST00000449397 678 ntBASIC3.56□□□□□ -1.84
APOBEC1P41238 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.56□□□□□ -1.84
APOBEC1P41238 SNORD121B-201ENST00000458838 81 ntBASIC3.56□□□□□ -1.84
APOBEC1P41238 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
APOBEC1P41238 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.56□□□□□ -1.84
APOBEC1P41238 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
APOBEC1P41238 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
APOBEC1P41238 CBX3P3-201ENST00000508108 532 ntBASIC3.56□□□□□ -1.84
APOBEC1P41238 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.56□□□□□ -1.84
APOBEC1P41238 AC026726.1-201ENST00000512859 601 ntBASIC3.56□□□□□ -1.84
APOBEC1P41238 AP002748.2-201ENST00000528671 348 ntBASIC3.56□□□□□ -1.84
APOBEC1P41238 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.56□□□□□ -1.84
APOBEC1P41238 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms