Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC096533.1-201ENST00000411645 353 ntBASIC1.87□□□□□ -2.11
SNCAP37840 RPL26P37-201ENST00000411983 438 ntBASIC1.87□□□□□ -2.11
SNCAP37840 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.87□□□□□ -2.11
SNCAP37840 HMGN2P38-201ENST00000423806 265 ntBASIC1.87□□□□□ -2.11
SNCAP37840 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.87□□□□□ -2.11
SNCAP37840 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC1.87□□□□□ -2.11
SNCAP37840 RPS7P2-201ENST00000435134 607 ntBASIC1.87□□□□□ -2.11
SNCAP37840 AL121871.1-201ENST00000443413 436 ntBASIC1.87□□□□□ -2.11
SNCAP37840 MTND2P8-201ENST00000450555 1025 ntBASIC1.87□□□□□ -2.11
SNCAP37840 snoU13.24-201ENST00000458998 104 ntBASIC1.87□□□□□ -2.11
SNCAP37840 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SNCAP37840 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SNCAP37840 AC097462.2-201ENST00000504623 481 ntBASIC1.87□□□□□ -2.11
SNCAP37840 AP004371.1-201ENST00000525240 214 ntBASIC1.87□□□□□ -2.11
SNCAP37840 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.87□□□□□ -2.11
SNCAP37840 SERPINE4P-201ENST00000554978 281 ntBASIC1.87□□□□□ -2.11
SNCAP37840 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SNCAP37840 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.87□□□□□ -2.11
SNCAP37840 NUTF2P8-201ENST00000604593 363 ntBASIC1.87□□□□□ -2.11
SNCAP37840 APOOP1-201ENST00000604695 592 ntBASIC1.87□□□□□ -2.11
SNCAP37840 NF1P10-201ENST00000613227 742 ntBASIC1.87□□□□□ -2.11
SNCAP37840 AC098657.3-201ENST00000620434 263 ntBASIC1.87□□□□□ -2.11
SNCAP37840 AC020923.1-201ENST00000624021 917 ntBASIC1.87□□□□□ -2.11
SNCAP37840 AP001002.2-201ENST00000625137 386 ntBASIC1.87□□□□□ -2.11
SNCAP37840 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC1.87□□□□□ -2.11
SNCAP37840 AC119674.1-212ENST00000641155 993 ntBASIC1.87□□□□□ -2.11
SNCAP37840 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.87□□□□□ -2.11
SNCAP37840 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
SNCAP37840 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SNCAP37840 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC1.86□□□□□ -2.11
SNCAP37840 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SNCAP37840 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.86□□□□□ -2.11
SNCAP37840 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SNCAP37840 HSPE1P11-201ENST00000339579 310 ntBASIC1.86□□□□□ -2.11
SNCAP37840 OR56A5-201ENST00000340110 738 ntBASIC1.86□□□□□ -2.11
SNCAP37840 RNU6-1181P-201ENST00000384191 106 ntBASIC1.86□□□□□ -2.11
SNCAP37840 TAS2R15P-201ENST00000390674 928 ntBASIC1.86□□□□□ -2.11
SNCAP37840 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SNCAP37840 U3.40-201ENST00000408706 208 ntBASIC1.86□□□□□ -2.11
SNCAP37840 RNU2-21P-201ENST00000410368 188 ntBASIC1.86□□□□□ -2.11
SNCAP37840 RNU2-40P-201ENST00000410833 196 ntBASIC1.86□□□□□ -2.11
SNCAP37840 RNA5SP184-201ENST00000411071 108 ntBASIC1.86□□□□□ -2.11
SNCAP37840 AL606495.1-201ENST00000422100 813 ntBASIC1.86□□□□□ -2.11
SNCAP37840 TRGV7-201ENST00000427089 353 ntBASIC1.86□□□□□ -2.11
SNCAP37840 AC092427.1-202ENST00000430569 476 ntBASIC1.86□□□□□ -2.11
SNCAP37840 CYCSP32-201ENST00000440548 321 ntBASIC1.86□□□□□ -2.11
SNCAP37840 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.86□□□□□ -2.11
SNCAP37840 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SNCAP37840 RNU6-717P-201ENST00000459076 104 ntBASIC1.86□□□□□ -2.11
SNCAP37840 AP002371.1-201ENST00000463604 433 ntBASIC1.86□□□□□ -2.11
SNCAP37840 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SNCAP37840 RN7SL432P-201ENST00000484057 298 ntBASIC1.86□□□□□ -2.11
SNCAP37840 SLC25A15P5-201ENST00000508033 253 ntBASIC1.86□□□□□ -2.11
SNCAP37840 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.86□□□□□ -2.11
SNCAP37840 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC1.86□□□□□ -2.11
SNCAP37840 AC105914.1-201ENST00000511798 226 ntBASIC1.86□□□□□ -2.11
SNCAP37840 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.86□□□□□ -2.11
SNCAP37840 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.86□□□□□ -2.11
SNCAP37840 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.86□□□□□ -2.11
SNCAP37840 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.86□□□□□ -2.11
SNCAP37840 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.86□□□□□ -2.11
SNCAP37840 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.86□□□□□ -2.11
SNCAP37840 AL160394.1-201ENST00000624765 724 ntBASIC1.86□□□□□ -2.11
SNCAP37840 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.86□□□□□ -2.11
SNCAP37840 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.86□□□□□ -2.11
SNCAP37840 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SNCAP37840 AC069528.2-201ENST00000624849 1991 ntBASIC1.86□□□□□ -2.11
SNCAP37840 ZNF833P-201ENST00000424938 1494 ntBASIC1.86□□□□□ -2.11
SNCAP37840 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SNCAP37840 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
SNCAP37840 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.85□□□□□ -2.11
SNCAP37840 RNA5SP138-201ENST00000365098 114 ntBASIC1.85□□□□□ -2.11
SNCAP37840 OR5H15-201ENST00000383696 930 ntBASIC1.85□□□□□ -2.11
SNCAP37840 RNU6-629P-201ENST00000384061 103 ntBASIC1.85□□□□□ -2.11
SNCAP37840 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.85□□□□□ -2.11
SNCAP37840 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC1.85□□□□□ -2.11
SNCAP37840 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.85□□□□□ -2.11
SNCAP37840 UBE2D3P2-201ENST00000424409 445 ntBASIC1.85□□□□□ -2.11
SNCAP37840 AC025750.2-201ENST00000442609 450 ntBASIC1.85□□□□□ -2.11
SNCAP37840 RPL31P20-201ENST00000449593 360 ntBASIC1.85□□□□□ -2.11
SNCAP37840 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC1.85□□□□□ -2.11
SNCAP37840 AL035407.2-201ENST00000454090 378 ntBASIC1.85□□□□□ -2.11
SNCAP37840 AC004263.1-201ENST00000479327 332 ntBASIC1.85□□□□□ -2.11
SNCAP37840 AC114322.1-201ENST00000506771 926 ntBASIC1.85□□□□□ -2.11
SNCAP37840 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.85□□□□□ -2.11
SNCAP37840 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.85□□□□□ -2.11
SNCAP37840 AC016550.3-201ENST00000515706 767 ntBASIC1.85□□□□□ -2.11
SNCAP37840 UBTFL10-201ENST00000528532 562 ntBASIC1.85□□□□□ -2.11
SNCAP37840 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.85□□□□□ -2.11
SNCAP37840 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.85□□□□□ -2.11
SNCAP37840 HMGB1P6-201ENST00000569046 646 ntBASIC1.85□□□□□ -2.11
SNCAP37840 AC012182.1-201ENST00000570133 895 ntBASIC1.85□□□□□ -2.11
SNCAP37840 MIR4319-201ENST00000577285 85 ntBASIC1.85□□□□□ -2.11
SNCAP37840 LARP7P3-201ENST00000579888 337 ntBASIC1.85□□□□□ -2.11
SNCAP37840 AC006023.1-201ENST00000603944 259 ntBASIC1.85□□□□□ -2.11
SNCAP37840 AC013562.2-201ENST00000611632 603 ntBASIC1.85□□□□□ -2.11
SNCAP37840 AC006963.1-201ENST00000624003 1052 ntBASIC1.85□□□□□ -2.11
SNCAP37840 AC006386.2-201ENST00000624491 75 ntBASIC1.85□□□□□ -2.11
SNCAP37840 AC012005.1-201ENST00000624575 75 ntBASIC1.85□□□□□ -2.11
SNCAP37840 FAM157B-203ENST00000639350 358 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms