Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.24□□□□□ -1.73
CIITAP33076 AL139286.2-201ENST00000606838 396 ntBASIC4.24□□□□□ -1.73
CIITAP33076 AC012360.2-201ENST00000609349 391 ntBASIC4.24□□□□□ -1.73
CIITAP33076 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CIITAP33076 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CIITAP33076 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CIITAP33076 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.24□□□□□ -1.73
CIITAP33076 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.24□□□□□ -1.73
CIITAP33076 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CIITAP33076 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CIITAP33076 DCAF13P1-201ENST00000495256 1330 ntBASIC4.23□□□□□ -1.73
CIITAP33076 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.23□□□□□ -1.73
CIITAP33076 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CIITAP33076 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CIITAP33076 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CIITAP33076 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CIITAP33076 RNU1-85P-201ENST00000364127 164 ntBASIC4.23□□□□□ -1.73
CIITAP33076 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CIITAP33076 MIR554-201ENST00000384874 96 ntBASIC4.23□□□□□ -1.73
CIITAP33076 RNU2-16P-201ENST00000410712 136 ntBASIC4.23□□□□□ -1.73
CIITAP33076 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.23□□□□□ -1.73
CIITAP33076 MTCO3P30-201ENST00000426425 670 ntBASIC4.23□□□□□ -1.73
CIITAP33076 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.23□□□□□ -1.73
CIITAP33076 AC018644.1-201ENST00000429934 551 ntBASIC4.23□□□□□ -1.73
CIITAP33076 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.23□□□□□ -1.73
CIITAP33076 CKS1BP5-201ENST00000434172 273 ntBASIC4.23□□□□□ -1.73
CIITAP33076 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.23□□□□□ -1.73
CIITAP33076 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.23□□□□□ -1.73
CIITAP33076 ACTR3P3-201ENST00000480448 893 ntBASIC4.23□□□□□ -1.73
CIITAP33076 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.23□□□□□ -1.73
CIITAP33076 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.23□□□□□ -1.73
CIITAP33076 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.23□□□□□ -1.73
CIITAP33076 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.23□□□□□ -1.73
CIITAP33076 TMEM248P1-201ENST00000510579 951 ntBASIC4.23□□□□□ -1.73
CIITAP33076 RNU1-45P-201ENST00000517191 141 ntBASIC4.23□□□□□ -1.73
CIITAP33076 AC023632.4-201ENST00000517783 191 ntBASIC4.23□□□□□ -1.73
CIITAP33076 AC239860.2-201ENST00000525886 270 ntBASIC4.23□□□□□ -1.73
CIITAP33076 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.23□□□□□ -1.73
CIITAP33076 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CIITAP33076 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.23□□□□□ -1.73
CIITAP33076 LSM6P2-201ENST00000552208 177 ntBASIC4.23□□□□□ -1.73
CIITAP33076 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.23□□□□□ -1.73
CIITAP33076 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.23□□□□□ -1.73
CIITAP33076 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.23□□□□□ -1.73
CIITAP33076 uc_338.32-201ENST00000615087 172 ntBASIC4.23□□□□□ -1.73
CIITAP33076 AL357080.1-201ENST00000617394 239 ntBASIC4.23□□□□□ -1.73
CIITAP33076 AC231657.1-201ENST00000624313 397 ntBASIC4.23□□□□□ -1.73
CIITAP33076 AC012442.3-202ENST00000636742 206 ntBASIC4.23□□□□□ -1.73
CIITAP33076 LINC00561-201ENST00000565815 2738 ntBASIC4.23□□□□□ -1.73
CIITAP33076 MTND4P16-201ENST00000466108 1367 ntBASIC4.23□□□□□ -1.73
CIITAP33076 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CIITAP33076 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
CIITAP33076 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CIITAP33076 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.22□□□□□ -1.73
CIITAP33076 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CIITAP33076 AL079343.1-201ENST00000572358 1771 ntBASIC4.22□□□□□ -1.73
CIITAP33076 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CIITAP33076 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.22□□□□□ -1.73
CIITAP33076 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.22□□□□□ -1.73
CIITAP33076 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CIITAP33076 MTCO1P23-201ENST00000415223 1526 ntBASIC4.22□□□□□ -1.73
CIITAP33076 AC018555.1-201ENST00000567548 1980 ntBASIC4.22□□□□□ -1.73
CIITAP33076 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CIITAP33076 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CIITAP33076 Y_RNA.41-201ENST00000362646 102 ntBASIC4.22□□□□□ -1.73
CIITAP33076 RNU6-462P-201ENST00000362659 105 ntBASIC4.22□□□□□ -1.73
CIITAP33076 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CIITAP33076 RNY3P10-201ENST00000384764 102 ntBASIC4.22□□□□□ -1.73
CIITAP33076 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.22□□□□□ -1.73
CIITAP33076 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.22□□□□□ -1.73
CIITAP33076 MTCYBP24-201ENST00000420387 1106 ntBASIC4.22□□□□□ -1.73
CIITAP33076 AL391219.1-201ENST00000422570 483 ntBASIC4.22□□□□□ -1.73
CIITAP33076 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.22□□□□□ -1.73
CIITAP33076 AC092427.1-201ENST00000439177 601 ntBASIC4.22□□□□□ -1.73
CIITAP33076 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.22□□□□□ -1.73
CIITAP33076 MTCO1P48-201ENST00000448024 1096 ntBASIC4.22□□□□□ -1.73
CIITAP33076 RPL39P6-201ENST00000448289 150 ntBASIC4.22□□□□□ -1.73
CIITAP33076 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.22□□□□□ -1.73
CIITAP33076 RNA5SP269-201ENST00000459032 137 ntBASIC4.22□□□□□ -1.73
CIITAP33076 AC097493.1-201ENST00000463958 372 ntBASIC4.22□□□□□ -1.73
CIITAP33076 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CIITAP33076 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.22□□□□□ -1.73
CIITAP33076 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CIITAP33076 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.22□□□□□ -1.73
CIITAP33076 RNU1-95P-201ENST00000516357 160 ntBASIC4.22□□□□□ -1.73
CIITAP33076 SNORA67.7-201ENST00000516664 135 ntBASIC4.22□□□□□ -1.73
CIITAP33076 RNU1-128P-201ENST00000516704 160 ntBASIC4.22□□□□□ -1.73
CIITAP33076 MTND1P5-201ENST00000517906 940 ntBASIC4.22□□□□□ -1.73
CIITAP33076 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.22□□□□□ -1.73
CIITAP33076 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.22□□□□□ -1.73
CIITAP33076 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CIITAP33076 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.22□□□□□ -1.73
CIITAP33076 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.22□□□□□ -1.73
CIITAP33076 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.22□□□□□ -1.73
CIITAP33076 PCMTD1P2-201ENST00000565017 355 ntBASIC4.22□□□□□ -1.73
CIITAP33076 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.22□□□□□ -1.73
CIITAP33076 AC010546.1-201ENST00000569391 485 ntBASIC4.22□□□□□ -1.73
CIITAP33076 LARP7P2-201ENST00000575306 125 ntBASIC4.22□□□□□ -1.73
CIITAP33076 AP001004.1-201ENST00000582468 324 ntBASIC4.22□□□□□ -1.73
CIITAP33076 AC087683.1-201ENST00000591187 441 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms