Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 RNU4-20P-201ENST00000365601 151 ntBASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 SNORA70F-201ENST00000384142 135 ntBASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 CD3D-202ENST00000392884 476 ntTSL 2 BASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 AL035079.1-201ENST00000405210 287 ntBASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 RN7SKP17-201ENST00000411242 351 ntBASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 HSPE1P1-201ENST00000421494 318 ntBASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 AC092832.1-201ENST00000422934 400 ntBASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 AC005517.2-201ENST00000424673 553 ntBASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 RPL7AP49-201ENST00000429522 581 ntBASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 AL591438.1-201ENST00000433508 581 ntBASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 AC016831.4-201ENST00000438302 307 ntBASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 MTND2P29-201ENST00000438595 412 ntBASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 AC012181.1-201ENST00000479895 423 ntBASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 CDV3-208ENST00000511392 554 ntTSL 5 BASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 RNA5SP392-201ENST00000516905 112 ntBASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 MIR6133-201ENST00000617057 108 ntBASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 AC022106.2-201ENST00000620114 757 ntBASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 AC244517.12-201ENST00000623581 663 ntBASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 AC108751.5-201ENST00000492880 1336 ntBASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 AC107027.3-201ENST00000565095 3473 ntBASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 RNU6-169P-201ENST00000365336 107 ntBASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 RNU6-1222P-201ENST00000384615 107 ntBASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 U3.30-201ENST00000391308 210 ntBASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 MIR1302-3-201ENST00000408128 138 ntBASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 Y_RNA.618-201ENST00000410949 107 ntBASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 AC114755.2-201ENST00000413520 361 ntBASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 COX6CP13-201ENST00000428703 226 ntBASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 RPL12P46-201ENST00000436610 195 ntBASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 AC104308.1-201ENST00000454621 333 ntBASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 AC007547.1-201ENST00000462177 490 ntBASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 MTATP8P1-201ENST00000467115 207 ntBASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 AP003497.1-201ENST00000528472 562 ntBASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 PTP4A1P6-201ENST00000531034 478 ntBASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 APOOP1-201ENST00000604695 592 ntBASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 AC005014.2-201ENST00000607795 599 ntBASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 CR381572.2-201ENST00000624852 397 ntBASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 CD36-221ENST00000534394 1741 ntTSL 2 BASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 AC114546.3-201ENST00000623582 1734 ntBASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CSB-PGBD3P0DP91 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 OR1S2-201ENST00000302592 978 ntBASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 Y_RNA.188-201ENST00000363952 111 ntBASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 RN7SKP227-201ENST00000364445 330 ntBASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 Y_RNA.255-201ENST00000364581 97 ntBASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 MIR1-2-201ENST00000384961 85 ntBASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 AC127526.1-201ENST00000417526 366 ntBASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 RPL30P3-201ENST00000424262 333 ntBASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 MRPS21P2-201ENST00000424704 264 ntBASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 AL137792.2-201ENST00000443484 235 ntBASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 RPS5P7-201ENST00000456664 608 ntBASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 RNU7-63P-201ENST00000459054 62 ntBASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 AC087385.1-201ENST00000475062 312 ntBASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 AC093303.1-201ENST00000514549 295 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms