Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.59□□□□□ -1.83
VTNP04004 LSM6P2-201ENST00000552208 177 ntBASIC3.59□□□□□ -1.83
VTNP04004 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.59□□□□□ -1.83
VTNP04004 AC009712.1-201ENST00000564938 316 ntBASIC3.59□□□□□ -1.83
VTNP04004 AL512347.1-201ENST00000566420 503 ntBASIC3.59□□□□□ -1.83
VTNP04004 AC106782.4-201ENST00000568264 210 ntBASIC3.59□□□□□ -1.83
VTNP04004 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.59□□□□□ -1.83
VTNP04004 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.59□□□□□ -1.83
VTNP04004 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.59□□□□□ -1.83
VTNP04004 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
VTNP04004 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.59□□□□□ -1.83
VTNP04004 AC103881.1-201ENST00000603476 538 ntBASIC3.59□□□□□ -1.83
VTNP04004 AL139286.1-201ENST00000604465 483 ntBASIC3.59□□□□□ -1.83
VTNP04004 AC091946.2-201ENST00000606105 291 ntBASIC3.59□□□□□ -1.83
VTNP04004 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.59□□□□□ -1.83
VTNP04004 AP001521.1-201ENST00000609150 300 ntBASIC3.59□□□□□ -1.83
VTNP04004 AL157817.1-201ENST00000614264 790 ntBASIC3.59□□□□□ -1.83
VTNP04004 Z99129.2-201ENST00000619967 314 ntBASIC3.59□□□□□ -1.83
VTNP04004 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.59□□□□□ -1.83
VTNP04004 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.59□□□□□ -1.83
VTNP04004 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VTNP04004 ZNF542P-204ENST00000482727 1305 ntBASIC3.59□□□□□ -1.83
VTNP04004 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VTNP04004 AC117529.2-201ENST00000512159 2068 ntBASIC3.59□□□□□ -1.83
VTNP04004 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
VTNP04004 AP001486.2-201ENST00000561652 5113 ntBASIC3.59□□□□□ -1.84
VTNP04004 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
VTNP04004 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VTNP04004 SSXP10-201ENST00000402595 565 ntBASIC3.58□□□□□ -1.84
VTNP04004 AL355379.1-201ENST00000405542 640 ntBASIC3.58□□□□□ -1.84
VTNP04004 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VTNP04004 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.58□□□□□ -1.84
VTNP04004 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.58□□□□□ -1.84
VTNP04004 RPL23AP82-202ENST00000427528 469 ntBASIC3.58□□□□□ -1.84
VTNP04004 FTH1P6-201ENST00000430768 320 ntBASIC3.58□□□□□ -1.84
VTNP04004 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.58□□□□□ -1.84
VTNP04004 RPS25P9-201ENST00000435591 252 ntBASIC3.58□□□□□ -1.84
VTNP04004 USP9YP7-201ENST00000436723 430 ntBASIC3.58□□□□□ -1.84
VTNP04004 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.58□□□□□ -1.84
VTNP04004 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.58□□□□□ -1.84
VTNP04004 MTCO1P48-201ENST00000448024 1096 ntBASIC3.58□□□□□ -1.84
VTNP04004 USP9YP32-201ENST00000452432 430 ntBASIC3.58□□□□□ -1.84
VTNP04004 ART2BP-201ENST00000453501 499 ntBASIC3.58□□□□□ -1.84
VTNP04004 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.58□□□□□ -1.84
VTNP04004 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.58□□□□□ -1.84
VTNP04004 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.58□□□□□ -1.84
VTNP04004 AP001992.1-205ENST00000462248 379 ntBASIC3.58□□□□□ -1.84
VTNP04004 RN7SL863P-201ENST00000462370 296 ntBASIC3.58□□□□□ -1.84
VTNP04004 CENPBD1P1-201ENST00000464061 469 ntBASIC3.58□□□□□ -1.84
VTNP04004 AC092757.1-201ENST00000467293 467 ntBASIC3.58□□□□□ -1.84
VTNP04004 RPS3AP43-201ENST00000479743 781 ntBASIC3.58□□□□□ -1.84
VTNP04004 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.58□□□□□ -1.84
VTNP04004 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VTNP04004 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.58□□□□□ -1.84
VTNP04004 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.58□□□□□ -1.84
VTNP04004 OR5AK1P-201ENST00000524837 922 ntBASIC3.58□□□□□ -1.84
VTNP04004 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.58□□□□□ -1.84
VTNP04004 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.58□□□□□ -1.84
VTNP04004 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.58□□□□□ -1.84
VTNP04004 OSBPL9P5-201ENST00000542581 171 ntBASIC3.58□□□□□ -1.84
VTNP04004 AC004024.1-201ENST00000549244 247 ntBASIC3.58□□□□□ -1.84
VTNP04004 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.58□□□□□ -1.84
VTNP04004 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.58□□□□□ -1.84
VTNP04004 MIR4325-201ENST00000583049 90 ntBASIC3.58□□□□□ -1.84
VTNP04004 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.58□□□□□ -1.84
VTNP04004 VN1R92P-201ENST00000598511 928 ntBASIC3.58□□□□□ -1.84
VTNP04004 AL009028.1-201ENST00000604895 802 ntBASIC3.58□□□□□ -1.84
VTNP04004 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.58□□□□□ -1.84
VTNP04004 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.58□□□□□ -1.84
VTNP04004 uc_338.1-201ENST00000612113 180 ntBASIC3.58□□□□□ -1.84
VTNP04004 AC018816.2-201ENST00000621460 353 ntBASIC3.58□□□□□ -1.84
VTNP04004 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.58□□□□□ -1.84
VTNP04004 AC068057.2-201ENST00000624047 895 ntBASIC3.58□□□□□ -1.84
VTNP04004 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VTNP04004 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
VTNP04004 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VTNP04004 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.58□□□□□ -1.84
VTNP04004 AC017071.1-201ENST00000564407 2204 ntBASIC3.58□□□□□ -1.84
VTNP04004 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.57□□□□□ -1.84
VTNP04004 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VTNP04004 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.57□□□□□ -1.84
VTNP04004 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
VTNP04004 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VTNP04004 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VTNP04004 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
VTNP04004 RNU6-1122P-201ENST00000384449 107 ntBASIC3.57□□□□□ -1.84
VTNP04004 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VTNP04004 AL049545.1-201ENST00000401856 572 ntBASIC3.57□□□□□ -1.84
VTNP04004 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VTNP04004 AL356131.1-201ENST00000405826 414 ntBASIC3.57□□□□□ -1.84
VTNP04004 AL023807.1-201ENST00000407932 359 ntBASIC3.57□□□□□ -1.84
VTNP04004 MIR1250-201ENST00000408098 113 ntBASIC3.57□□□□□ -1.84
VTNP04004 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.57□□□□□ -1.84
VTNP04004 PABPC1P7-201ENST00000413177 1513 ntBASIC3.57□□□□□ -1.84
VTNP04004 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.57□□□□□ -1.84
VTNP04004 TIMM9P2-201ENST00000419324 266 ntBASIC3.57□□□□□ -1.84
VTNP04004 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.57□□□□□ -1.84
VTNP04004 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.57□□□□□ -1.84
VTNP04004 SGO1P2-201ENST00000429458 1589 ntBASIC3.57□□□□□ -1.84
VTNP04004 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 147.6 ms