Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
COL4A1P02462 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC2.44□□□□□ -2.02
COL4A1P02462 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC2.43□□□□□ -2.02
COL4A1P02462 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.43□□□□□ -2.02
COL4A1P02462 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.43□□□□□ -2.02
COL4A1P02462 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.43□□□□□ -2.02
COL4A1P02462 AC129850.1-201ENST00000436203 508 ntBASIC2.43□□□□□ -2.02
COL4A1P02462 RPL39P40-201ENST00000445481 146 ntBASIC2.43□□□□□ -2.02
COL4A1P02462 HSPE1P22-201ENST00000456856 327 ntBASIC2.43□□□□□ -2.02
COL4A1P02462 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.43□□□□□ -2.02
COL4A1P02462 RNA5SP445-201ENST00000515889 115 ntBASIC2.43□□□□□ -2.02
COL4A1P02462 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC2.43□□□□□ -2.02
COL4A1P02462 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
COL4A1P02462 GNAI2P1-201ENST00000541815 315 ntBASIC2.43□□□□□ -2.02
COL4A1P02462 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.43□□□□□ -2.02
COL4A1P02462 AC010615.3-201ENST00000597319 394 ntBASIC2.43□□□□□ -2.02
COL4A1P02462 AC091834.1-201ENST00000614543 472 ntBASIC2.43□□□□□ -2.02
COL4A1P02462 AL353997.5-201ENST00000618886 171 ntBASIC2.43□□□□□ -2.02
COL4A1P02462 MTCO1P14-201ENST00000441695 1559 ntBASIC2.43□□□□□ -2.02
COL4A1P02462 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
COL4A1P02462 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
COL4A1P02462 RNA5SP160-201ENST00000364866 120 ntBASIC2.42□□□□□ -2.02
COL4A1P02462 RNA5SP338-201ENST00000410495 85 ntBASIC2.42□□□□□ -2.02
COL4A1P02462 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC2.42□□□□□ -2.02
COL4A1P02462 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.42□□□□□ -2.02
COL4A1P02462 AC104435.1-201ENST00000483483 166 ntBASIC2.42□□□□□ -2.02
COL4A1P02462 AC007182.2-201ENST00000489251 402 ntBASIC2.42□□□□□ -2.02
COL4A1P02462 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.42□□□□□ -2.02
COL4A1P02462 AC091917.2-201ENST00000505002 744 ntBASIC2.42□□□□□ -2.02
COL4A1P02462 RNU4-18P-201ENST00000516751 149 ntBASIC2.42□□□□□ -2.02
COL4A1P02462 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
COL4A1P02462 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.42□□□□□ -2.02
COL4A1P02462 OR4H12P-201ENST00000556269 907 ntBASIC2.42□□□□□ -2.02
COL4A1P02462 ADAM3B-201ENST00000569937 840 ntBASIC2.42□□□□□ -2.02
COL4A1P02462 AC115989.2-201ENST00000578640 563 ntBASIC2.42□□□□□ -2.02
COL4A1P02462 AC060766.3-201ENST00000591442 263 ntBASIC2.42□□□□□ -2.02
COL4A1P02462 PSMA6P4-201ENST00000603247 718 ntBASIC2.42□□□□□ -2.02
COL4A1P02462 AL713998.2-201ENST00000604538 1198 ntBASIC2.42□□□□□ -2.02
COL4A1P02462 AL133370.2-201ENST00000619934 439 ntBASIC2.42□□□□□ -2.02
COL4A1P02462 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
COL4A1P02462 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL4A1P02462 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL4A1P02462 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
COL4A1P02462 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
COL4A1P02462 Y_RNA.338-201ENST00000365320 114 ntBASIC2.41□□□□□ -2.02
COL4A1P02462 SNORA40.18-201ENST00000391200 128 ntBASIC2.41□□□□□ -2.02
COL4A1P02462 SNORA26.9-201ENST00000391322 122 ntBASIC2.41□□□□□ -2.02
COL4A1P02462 RNA5SP181-201ENST00000410246 98 ntBASIC2.41□□□□□ -2.02
COL4A1P02462 HMGB3P10-201ENST00000434734 572 ntBASIC2.41□□□□□ -2.02
COL4A1P02462 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.41□□□□□ -2.02
COL4A1P02462 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.41□□□□□ -2.02
COL4A1P02462 RNA5SP402-201ENST00000517148 110 ntBASIC2.41□□□□□ -2.02
COL4A1P02462 AL121839.1-201ENST00000556233 1185 ntBASIC2.41□□□□□ -2.02
COL4A1P02462 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC2.41□□□□□ -2.02
COL4A1P02462 AL159169.2-201ENST00000610061 1269 ntBASIC2.41□□□□□ -2.02
COL4A1P02462 AC116447.1-201ENST00000613153 453 ntBASIC2.41□□□□□ -2.02
COL4A1P02462 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.41□□□□□ -2.02
COL4A1P02462 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.41□□□□□ -2.02
COL4A1P02462 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC2.41□□□□□ -2.02
COL4A1P02462 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
COL4A1P02462 MIR1287-201ENST00000408492 90 ntBASIC2.41□□□□□ -2.02
COL4A1P02462 AC108667.1-201ENST00000428618 249 ntBASIC2.41□□□□□ -2.02
COL4A1P02462 RPL7P54-201ENST00000438336 674 ntBASIC2.41□□□□□ -2.02
COL4A1P02462 AC233279.1-201ENST00000455300 423 ntBASIC2.41□□□□□ -2.02
COL4A1P02462 OR7L1P-201ENST00000456181 380 ntBASIC2.41□□□□□ -2.02
COL4A1P02462 RPL36AP21-201ENST00000490372 323 ntBASIC2.41□□□□□ -2.02
COL4A1P02462 RPL23AP63-201ENST00000498752 471 ntBASIC2.41□□□□□ -2.02
COL4A1P02462 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.41□□□□□ -2.02
COL4A1P02462 AP001960.1-201ENST00000506494 658 ntBASIC2.41□□□□□ -2.02
COL4A1P02462 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.41□□□□□ -2.02
COL4A1P02462 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.41□□□□□ -2.02
COL4A1P02462 ABI1P1-201ENST00000603375 1120 ntBASIC2.41□□□□□ -2.02
COL4A1P02462 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC2.41□□□□□ -2.02
COL4A1P02462 AC004943.3-201ENST00000624116 600 ntBASIC2.41□□□□□ -2.02
COL4A1P02462 ADAM3A-203ENST00000461344 2157 ntBASIC2.41□□□□□ -2.02
COL4A1P02462 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
COL4A1P02462 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
COL4A1P02462 NSRP1P1-201ENST00000444067 1693 ntBASIC2.4□□□□□ -2.03
COL4A1P02462 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.4□□□□□ -2.03
COL4A1P02462 RNU6-1331P-201ENST00000363658 106 ntBASIC2.4□□□□□ -2.03
COL4A1P02462 RN7SKP226-201ENST00000364912 300 ntBASIC2.4□□□□□ -2.03
COL4A1P02462 Y_RNA.466-201ENST00000384294 113 ntBASIC2.4□□□□□ -2.03
COL4A1P02462 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
COL4A1P02462 AL138787.1-202ENST00000437804 898 ntBASIC2.4□□□□□ -2.03
COL4A1P02462 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.4□□□□□ -2.03
COL4A1P02462 TRAV31-201ENST00000502780 342 ntBASIC2.4□□□□□ -2.03
COL4A1P02462 FAM92A1P1-201ENST00000528023 890 ntBASIC2.4□□□□□ -2.03
COL4A1P02462 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.4□□□□□ -2.03
COL4A1P02462 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.4□□□□□ -2.03
COL4A1P02462 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.4□□□□□ -2.03
COL4A1P02462 MIR4498-201ENST00000577599 66 ntBASIC2.4□□□□□ -2.03
COL4A1P02462 CUL4AP1-201ENST00000514750 1863 ntBASIC2.4□□□□□ -2.03
COL4A1P02462 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
COL4A1P02462 CR382285.2-201ENST00000624662 1495 ntBASIC2.4□□□□□ -2.03
COL4A1P02462 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.39□□□□□ -2.03
COL4A1P02462 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
COL4A1P02462 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
COL4A1P02462 RNU6-457P-201ENST00000363999 107 ntBASIC2.39□□□□□ -2.03
COL4A1P02462 AL450338.1-201ENST00000407987 512 ntBASIC2.39□□□□□ -2.03
COL4A1P02462 UBE2V2P1-201ENST00000434717 398 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms