Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.4□□□□□ -2.03
HLA-DQA1P01909 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.4□□□□□ -2.03
HLA-DQA1P01909 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.4□□□□□ -2.03
HLA-DQA1P01909 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.4□□□□□ -2.03
HLA-DQA1P01909 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HLA-DQA1P01909 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.4□□□□□ -2.03
HLA-DQA1P01909 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HLA-DQA1P01909 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.4□□□□□ -2.03
HLA-DQA1P01909 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.4□□□□□ -2.03
HLA-DQA1P01909 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.4□□□□□ -2.03
HLA-DQA1P01909 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.4□□□□□ -2.03
HLA-DQA1P01909 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.4□□□□□ -2.03
HLA-DQA1P01909 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.4□□□□□ -2.03
HLA-DQA1P01909 AC023043.3-201ENST00000593113 385 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 BNIP3P24-201ENST00000593398 557 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.4□□□□□ -2.03
HLA-DQA1P01909 AC010591.1-201ENST00000603941 649 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 AP001330.4-201ENST00000604350 154 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.4□□□□□ -2.03
HLA-DQA1P01909 PART1_2.1-201ENST00000612397 250 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 AC104763.3-201ENST00000613765 618 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 AL355810.1-201ENST00000614629 552 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 CYCSP41-201ENST00000616920 296 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
HLA-DQA1P01909 AC015967.1-201ENST00000619893 476 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 AL590240.3-201ENST00000621416 943 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HLA-DQA1P01909 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HLA-DQA1P01909 MTND4P9-201ENST00000507819 1346 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 AL136164.4-201ENST00000625013 2135 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HLA-DQA1P01909 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HLA-DQA1P01909 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HLA-DQA1P01909 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HLA-DQA1P01909 OR5H2-201ENST00000355273 945 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 RNU6-878P-201ENST00000384578 110 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 U8.11-201ENST00000384699 133 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 U8.12-201ENST00000384701 133 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 SNORA26.7-201ENST00000391288 122 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 RPL21P17-201ENST00000397467 475 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.39□□□□□ -2.03
HLA-DQA1P01909 RNA5SP229-201ENST00000410809 99 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 AC068533.2-201ENST00000411872 306 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 ATP5A1P2-201ENST00000412323 255 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 Z75741.2-201ENST00000417272 1167 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 RPL7P30-201ENST00000420888 709 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HLA-DQA1P01909 GOT2P5-201ENST00000433995 546 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 AC007389.2-201ENST00000434630 306 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.39□□□□□ -2.03
HLA-DQA1P01909 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.39□□□□□ -2.03
HLA-DQA1P01909 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HLA-DQA1P01909 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
HLA-DQA1P01909 MTCYBP11-201ENST00000447254 1109 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 AL359073.1-201ENST00000448036 403 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC2.39□□□□□ -2.03
HLA-DQA1P01909 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.39□□□□□ -2.03
HLA-DQA1P01909 U8.18-201ENST00000459285 133 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 RPS26P21-201ENST00000475397 348 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 MTCYBP17-201ENST00000503579 789 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.39□□□□□ -2.03
HLA-DQA1P01909 HMGB1P28-201ENST00000507778 552 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 KLHL2P1-201ENST00000508691 521 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 AC113347.3-201ENST00000509113 148 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 AC104619.4-201ENST00000510773 249 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 AC008837.2-201ENST00000513076 418 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 RNU6-1095P-201ENST00000516148 108 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 RNA5SP76-201ENST00000516277 87 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 SNORA31.26-201ENST00000517250 137 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.39□□□□□ -2.03
HLA-DQA1P01909 AC007991.1-201ENST00000522680 631 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 AC021451.1-201ENST00000523498 1129 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.39□□□□□ -2.03
HLA-DQA1P01909 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.39□□□□□ -2.03
HLA-DQA1P01909 SNRPGP16-201ENST00000533275 226 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 AC024224.1-201ENST00000538284 609 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.39□□□□□ -2.03
HLA-DQA1P01909 AC018630.1-201ENST00000541376 925 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.39□□□□□ -2.03
HLA-DQA1P01909 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.39□□□□□ -2.03
HLA-DQA1P01909 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.39□□□□□ -2.03
HLA-DQA1P01909 MTCO3P24-201ENST00000572729 782 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HLA-DQA1P01909 AL390838.2-201ENST00000602394 274 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 RPL23AP92-201ENST00000603609 255 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.39□□□□□ -2.03
HLA-DQA1P01909 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.39□□□□□ -2.03
HLA-DQA1P01909 AL121895.2-201ENST00000619558 447 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 AL353748.2-201ENST00000622148 471 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 AL161637.1-201ENST00000622380 412 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 MIR6733-201ENST00000635723 61 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 MIR1322-201ENST00000638013 71 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 LINC02211-204ENST00000642024 1070 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 AP002907.1-201ENST00000606361 1430 ntBASIC2.39□□□□□ -2.03
HLA-DQA1P01909 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
HLA-DQA1P01909 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
HLA-DQA1P01909 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HLA-DQA1P01909 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms