Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CLPTM1O96005 RPL23AP39-201ENST00000415533 405 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 AC017079.2-201ENST00000416102 485 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.52□□□□□ -1.85
CLPTM1O96005 OR4F13P-201ENST00000428478 931 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 ZYG11AP1-201ENST00000430329 837 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 MED14P1-201ENST00000430517 648 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 BX679664.1-201ENST00000434429 253 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 LARP1BP3-201ENST00000437229 869 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.52□□□□□ -1.85
CLPTM1O96005 MTND1P30-201ENST00000441241 901 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 RPL21P133-201ENST00000443666 476 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.52□□□□□ -1.85
CLPTM1O96005 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLPTM1O96005 USP9YP10-201ENST00000454868 628 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 RPS27P29-201ENST00000463110 252 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 AC097493.1-201ENST00000463958 372 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 AC084198.1-201ENST00000477747 402 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 RAP1BP2-201ENST00000478270 544 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 AC109486.1-201ENST00000486833 374 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 FCF1P3-201ENST00000496394 590 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.52□□□□□ -1.85
CLPTM1O96005 HMGB3P15-201ENST00000507326 574 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.52□□□□□ -1.85
CLPTM1O96005 Y_RNA.655-201ENST00000515919 96 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
CLPTM1O96005 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.52□□□□□ -1.85
CLPTM1O96005 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.52□□□□□ -1.85
CLPTM1O96005 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.52□□□□□ -1.85
CLPTM1O96005 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.52□□□□□ -1.85
CLPTM1O96005 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.52□□□□□ -1.85
CLPTM1O96005 ZNF705CP-201ENST00000530515 889 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CLPTM1O96005 LSM6P2-201ENST00000552208 177 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.52□□□□□ -1.85
CLPTM1O96005 GTF2IP22-201ENST00000554443 182 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.52□□□□□ -1.85
CLPTM1O96005 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.52□□□□□ -1.85
CLPTM1O96005 MAGOH2P-202ENST00000584384 429 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 AC067959.1-201ENST00000604334 379 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 AC011939.3-201ENST00000613686 466 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 MIR7151-201ENST00000617477 60 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.52□□□□□ -1.85
CLPTM1O96005 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CLPTM1O96005 RLIMP1-201ENST00000339626 1680 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 AL390237.1-201ENST00000404226 1415 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 AP002907.1-201ENST00000606361 1430 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 ELL2P4-201ENST00000446870 1376 ntBASIC3.51□□□□□ -1.85
CLPTM1O96005 MTND4P16-201ENST00000466108 1367 ntBASIC3.51□□□□□ -1.85
CLPTM1O96005 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.51□□□□□ -1.85
CLPTM1O96005 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLPTM1O96005 AL079343.1-201ENST00000572358 1771 ntBASIC3.51□□□□□ -1.85
CLPTM1O96005 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLPTM1O96005 RN7SKP227-201ENST00000364445 330 ntBASIC3.51□□□□□ -1.85
CLPTM1O96005 SNORA51.2-201ENST00000364595 132 ntBASIC3.51□□□□□ -1.85
CLPTM1O96005 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CLPTM1O96005 ENSAP1-201ENST00000392855 326 ntBASIC3.51□□□□□ -1.85
CLPTM1O96005 AC016769.3-201ENST00000396562 315 ntBASIC3.51□□□□□ -1.85
CLPTM1O96005 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CLPTM1O96005 RPL21P65-201ENST00000406094 466 ntBASIC3.51□□□□□ -1.85
CLPTM1O96005 HSPE1P12-201ENST00000412576 301 ntBASIC3.51□□□□□ -1.85
CLPTM1O96005 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.51□□□□□ -1.85
CLPTM1O96005 RPS15AP40-201ENST00000419621 391 ntBASIC3.51□□□□□ -1.85
CLPTM1O96005 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CLPTM1O96005 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLPTM1O96005 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.51□□□□□ -1.85
CLPTM1O96005 KCTD10P1-201ENST00000434203 625 ntBASIC3.51□□□□□ -1.85
CLPTM1O96005 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.51□□□□□ -1.85
CLPTM1O96005 RANP8-201ENST00000444720 713 ntBASIC3.51□□□□□ -1.85
CLPTM1O96005 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.51□□□□□ -1.85
CLPTM1O96005 EPS15P1-201ENST00000448836 336 ntBASIC3.51□□□□□ -1.85
CLPTM1O96005 RPL36AP33-201ENST00000450395 310 ntBASIC3.51□□□□□ -1.85
CLPTM1O96005 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.51□□□□□ -1.85
CLPTM1O96005 RPL38P1-201ENST00000460914 211 ntBASIC3.51□□□□□ -1.85
CLPTM1O96005 RPS4XP15-201ENST00000489210 795 ntBASIC3.51□□□□□ -1.85
CLPTM1O96005 TMEM251P1-201ENST00000503717 318 ntBASIC3.51□□□□□ -1.85
CLPTM1O96005 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.51□□□□□ -1.85
CLPTM1O96005 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.51□□□□□ -1.85
CLPTM1O96005 RN7SKP21-201ENST00000516503 220 ntBASIC3.51□□□□□ -1.85
CLPTM1O96005 Y_RNA.695-201ENST00000516715 107 ntBASIC3.51□□□□□ -1.85
CLPTM1O96005 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.51□□□□□ -1.85
CLPTM1O96005 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.51□□□□□ -1.85
CLPTM1O96005 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.51□□□□□ -1.85
CLPTM1O96005 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
CLPTM1O96005 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.51□□□□□ -1.85
CLPTM1O96005 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.51□□□□□ -1.85
CLPTM1O96005 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.51□□□□□ -1.85
CLPTM1O96005 AL845331.3-202ENST00000562856 261 ntBASIC3.51□□□□□ -1.85
CLPTM1O96005 AC037471.2-201ENST00000564941 598 ntBASIC3.51□□□□□ -1.85
CLPTM1O96005 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLPTM1O96005 MIR4637-201ENST00000582405 84 ntBASIC3.51□□□□□ -1.85
CLPTM1O96005 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.51□□□□□ -1.85
CLPTM1O96005 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.51□□□□□ -1.85
CLPTM1O96005 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.51□□□□□ -1.85
CLPTM1O96005 RSL24D1P11-201ENST00000591045 491 ntBASIC3.51□□□□□ -1.85
CLPTM1O96005 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.51□□□□□ -1.85
CLPTM1O96005 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.51□□□□□ -1.85
CLPTM1O96005 AC092354.1-201ENST00000606057 376 ntBASIC3.51□□□□□ -1.85
CLPTM1O96005 AC011816.2-201ENST00000607089 556 ntBASIC3.51□□□□□ -1.85
CLPTM1O96005 RNU4-89P-201ENST00000607443 133 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms