Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.68□□□□□ -1.82
CACNA1FO60840 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.68□□□□□ -1.82
CACNA1FO60840 DUXAP11-201ENST00000603858 526 ntBASIC3.68□□□□□ -1.82
CACNA1FO60840 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.68□□□□□ -1.82
CACNA1FO60840 AC024023.1-201ENST00000624530 922 ntBASIC3.68□□□□□ -1.82
CACNA1FO60840 MIR6715B-201ENST00000637172 77 ntBASIC3.68□□□□□ -1.82
CACNA1FO60840 MIR1322-201ENST00000638013 71 ntBASIC3.68□□□□□ -1.82
CACNA1FO60840 MTCO1P18-201ENST00000455518 1419 ntBASIC3.68□□□□□ -1.82
CACNA1FO60840 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.68□□□□□ -1.82
CACNA1FO60840 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CACNA1FO60840 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.68□□□□□ -1.82
CACNA1FO60840 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
CACNA1FO60840 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CACNA1FO60840 MIR92A2-201ENST00000385299 75 ntBASIC3.67□□□□□ -1.82
CACNA1FO60840 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CACNA1FO60840 MIR1183-201ENST00000408856 89 ntBASIC3.67□□□□□ -1.82
CACNA1FO60840 RNA5SP21-201ENST00000410917 96 ntBASIC3.67□□□□□ -1.82
CACNA1FO60840 RNU4-74P-201ENST00000411280 161 ntBASIC3.67□□□□□ -1.82
CACNA1FO60840 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.67□□□□□ -1.82
CACNA1FO60840 AC019097.1-201ENST00000424783 735 ntBASIC3.67□□□□□ -1.82
CACNA1FO60840 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.67□□□□□ -1.82
CACNA1FO60840 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.67□□□□□ -1.82
CACNA1FO60840 AL035407.1-201ENST00000429211 571 ntBASIC3.67□□□□□ -1.82
CACNA1FO60840 AC107083.1-201ENST00000439643 279 ntBASIC3.67□□□□□ -1.82
CACNA1FO60840 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.67□□□□□ -1.82
CACNA1FO60840 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.67□□□□□ -1.82
CACNA1FO60840 RNU6-1218P-201ENST00000458990 108 ntBASIC3.67□□□□□ -1.82
CACNA1FO60840 RPL23AP14-201ENST00000468281 468 ntBASIC3.67□□□□□ -1.82
CACNA1FO60840 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.67□□□□□ -1.82
CACNA1FO60840 AC111000.2-201ENST00000507775 550 ntBASIC3.67□□□□□ -1.82
CACNA1FO60840 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.67□□□□□ -1.82
CACNA1FO60840 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.67□□□□□ -1.82
CACNA1FO60840 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CACNA1FO60840 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.67□□□□□ -1.82
CACNA1FO60840 AC121247.2-201ENST00000604776 136 ntBASIC3.67□□□□□ -1.82
CACNA1FO60840 AC009237.15-201ENST00000610252 501 ntBASIC3.67□□□□□ -1.82
CACNA1FO60840 AC024257.5-201ENST00000612739 531 ntBASIC3.67□□□□□ -1.82
CACNA1FO60840 AC007494.3-201ENST00000624660 743 ntBASIC3.67□□□□□ -1.82
CACNA1FO60840 ZNF876P-202ENST00000398732 1485 ntBASIC3.67□□□□□ -1.82
CACNA1FO60840 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CACNA1FO60840 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CACNA1FO60840 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
CACNA1FO60840 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
CACNA1FO60840 AC111188.2-201ENST00000529697 1387 ntBASIC3.67□□□□□ -1.82
CACNA1FO60840 ZNF849P-201ENST00000594711 1566 ntBASIC3.67□□□□□ -1.82
CACNA1FO60840 RNA5SP184-201ENST00000411071 108 ntBASIC3.67□□□□□ -1.82
CACNA1FO60840 RNA5SP498-201ENST00000411342 120 ntBASIC3.67□□□□□ -1.82
CACNA1FO60840 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.67□□□□□ -1.82
CACNA1FO60840 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.67□□□□□ -1.82
CACNA1FO60840 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CACNA1FO60840 RN7SL75P-201ENST00000461926 281 ntBASIC3.67□□□□□ -1.82
CACNA1FO60840 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.67□□□□□ -1.82
CACNA1FO60840 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CACNA1FO60840 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CACNA1FO60840 AC021749.1-201ENST00000604322 607 ntBASIC3.67□□□□□ -1.82
CACNA1FO60840 SUMO2P14-201ENST00000604488 293 ntBASIC3.67□□□□□ -1.82
CACNA1FO60840 VN1R7P-201ENST00000619242 903 ntBASIC3.67□□□□□ -1.82
CACNA1FO60840 AC007490.1-201ENST00000624321 703 ntBASIC3.67□□□□□ -1.82
CACNA1FO60840 AC006386.2-201ENST00000624491 75 ntBASIC3.67□□□□□ -1.82
CACNA1FO60840 AC012005.1-201ENST00000624575 75 ntBASIC3.67□□□□□ -1.82
CACNA1FO60840 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.67□□□□□ -1.82
CACNA1FO60840 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.67□□□□□ -1.82
CACNA1FO60840 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.67□□□□□ -1.82
CACNA1FO60840 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.66□□□□□ -1.82
CACNA1FO60840 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CACNA1FO60840 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CACNA1FO60840 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CACNA1FO60840 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.66□□□□□ -1.82
CACNA1FO60840 U3.26-201ENST00000391236 204 ntBASIC3.66□□□□□ -1.82
CACNA1FO60840 RPS3AP26-201ENST00000398259 784 ntBASIC3.66□□□□□ -1.82
CACNA1FO60840 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.66□□□□□ -1.82
CACNA1FO60840 NUP35P1-201ENST00000422734 947 ntBASIC3.66□□□□□ -1.82
CACNA1FO60840 MTND4P20-201ENST00000424125 869 ntBASIC3.66□□□□□ -1.82
CACNA1FO60840 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.66□□□□□ -1.82
CACNA1FO60840 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.66□□□□□ -1.82
CACNA1FO60840 AC007327.1-201ENST00000447461 264 ntBASIC3.66□□□□□ -1.82
CACNA1FO60840 AC233982.1-201ENST00000451247 436 ntBASIC3.66□□□□□ -1.82
CACNA1FO60840 AL109741.2-201ENST00000455561 343 ntBASIC3.66□□□□□ -1.82
CACNA1FO60840 AC021205.1-201ENST00000468797 348 ntBASIC3.66□□□□□ -1.82
CACNA1FO60840 UBE2DNL-203ENST00000474922 222 ntBASIC3.66□□□□□ -1.82
CACNA1FO60840 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.66□□□□□ -1.82
CACNA1FO60840 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.66□□□□□ -1.82
CACNA1FO60840 AC093278.1-201ENST00000494700 600 ntBASIC3.66□□□□□ -1.82
CACNA1FO60840 AC026414.1-201ENST00000504046 698 ntBASIC3.66□□□□□ -1.82
CACNA1FO60840 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.66□□□□□ -1.82
CACNA1FO60840 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.66□□□□□ -1.82
CACNA1FO60840 HIGD1AP13-201ENST00000509878 289 ntBASIC3.66□□□□□ -1.82
CACNA1FO60840 RNU6-1308P-201ENST00000516817 103 ntBASIC3.66□□□□□ -1.82
CACNA1FO60840 MTCYBP20-201ENST00000524239 1129 ntBASIC3.66□□□□□ -1.82
CACNA1FO60840 OR5AK3P-201ENST00000527486 1297 ntBASIC3.66□□□□□ -1.82
CACNA1FO60840 DEFB130C-202ENST00000530001 230 ntBASIC3.66□□□□□ -1.82
CACNA1FO60840 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CACNA1FO60840 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.66□□□□□ -1.82
CACNA1FO60840 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.66□□□□□ -1.82
CACNA1FO60840 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.66□□□□□ -1.82
CACNA1FO60840 AC084757.1-201ENST00000559987 490 ntBASIC3.66□□□□□ -1.82
CACNA1FO60840 MIR4644-201ENST00000579929 84 ntBASIC3.66□□□□□ -1.82
CACNA1FO60840 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.66□□□□□ -1.82
CACNA1FO60840 MTCO2P22-201ENST00000603246 681 ntBASIC3.66□□□□□ -1.82
CACNA1FO60840 AC018618.2-201ENST00000604770 446 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms