Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 SCARNA4.1-201ENST00000628597 123 ntBASIC3.18□□□□□ -1.9
KLHL41O60662 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.18□□□□□ -1.9
KLHL41O60662 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KLHL41O60662 GDI2P1-201ENST00000429312 1336 ntBASIC3.18□□□□□ -1.9
KLHL41O60662 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KLHL41O60662 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KLHL41O60662 RNU6-792P-201ENST00000363490 107 ntBASIC3.17□□□□□ -1.9
KLHL41O60662 RNU6-619P-201ENST00000365146 108 ntBASIC3.17□□□□□ -1.9
KLHL41O60662 U8.9-201ENST00000365667 134 ntBASIC3.17□□□□□ -1.9
KLHL41O60662 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.17□□□□□ -1.9
KLHL41O60662 RNA5SP229-201ENST00000410809 99 ntBASIC3.17□□□□□ -1.9
KLHL41O60662 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.17□□□□□ -1.9
KLHL41O60662 AL353678.1-201ENST00000422735 741 ntBASIC3.17□□□□□ -1.9
KLHL41O60662 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.17□□□□□ -1.9
KLHL41O60662 AC109583.1-201ENST00000432156 268 ntBASIC3.17□□□□□ -1.9
KLHL41O60662 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.17□□□□□ -1.9
KLHL41O60662 AL590639.1-201ENST00000456484 337 ntBASIC3.17□□□□□ -1.9
KLHL41O60662 AC008155.2-201ENST00000464337 397 ntBASIC3.17□□□□□ -1.9
KLHL41O60662 ST13P14-201ENST00000474095 734 ntBASIC3.17□□□□□ -1.9
KLHL41O60662 RPL21P47-201ENST00000483696 477 ntBASIC3.17□□□□□ -1.9
KLHL41O60662 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KLHL41O60662 CBX3P3-201ENST00000508108 532 ntBASIC3.17□□□□□ -1.9
KLHL41O60662 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.17□□□□□ -1.9
KLHL41O60662 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.17□□□□□ -1.9
KLHL41O60662 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.17□□□□□ -1.9
KLHL41O60662 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.17□□□□□ -1.9
KLHL41O60662 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.17□□□□□ -1.9
KLHL41O60662 CKS1BP3-201ENST00000600888 237 ntBASIC3.17□□□□□ -1.9
KLHL41O60662 GAS5-AS1-201ENST00000602767 694 ntBASIC3.17□□□□□ -1.9
KLHL41O60662 AL671309.1-201ENST00000603750 544 ntBASIC3.17□□□□□ -1.9
KLHL41O60662 AC245100.7-201ENST00000609678 442 ntBASIC3.17□□□□□ -1.9
KLHL41O60662 AL591516.1-201ENST00000611326 274 ntBASIC3.17□□□□□ -1.9
KLHL41O60662 AC131902.3-201ENST00000611767 581 ntBASIC3.17□□□□□ -1.9
KLHL41O60662 AC135507.2-201ENST00000612443 309 ntBASIC3.17□□□□□ -1.9
KLHL41O60662 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
KLHL41O60662 BX649567.1-201ENST00000642071 1134 ntBASIC3.17□□□□□ -1.9
KLHL41O60662 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
KLHL41O60662 DBF4P1-201ENST00000412976 1892 ntBASIC3.17□□□□□ -1.9
KLHL41O60662 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
KLHL41O60662 AC093831.2-201ENST00000624393 3427 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KLHL41O60662 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KLHL41O60662 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
KLHL41O60662 ZNF519P1-201ENST00000449011 1626 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KLHL41O60662 SNORA26.7-201ENST00000391288 122 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 RPL21P75-201ENST00000396599 483 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 RPL21P28-201ENST00000401418 483 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 AL592114.1-201ENST00000403842 483 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 RNU4-27P-201ENST00000410889 139 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 BMS1P22-201ENST00000414726 313 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 AC245054.2-201ENST00000415639 319 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 RPL7P30-201ENST00000420888 709 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 AL645937.1-202ENST00000421799 937 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.16□□□□□ -1.9
KLHL41O60662 HMGB3P6-201ENST00000444896 598 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.16□□□□□ -1.9
KLHL41O60662 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.16□□□□□ -1.9
KLHL41O60662 NDUFA5P7-201ENST00000452914 242 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.16□□□□□ -1.9
KLHL41O60662 RPL21P39-201ENST00000463605 483 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 RPL27AP5-201ENST00000469428 449 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 AC011979.1-201ENST00000472300 483 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 RPL21P93-201ENST00000480465 489 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 AC233702.1-201ENST00000482905 502 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 AC087190.1-201ENST00000484462 480 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 AC093591.1-201ENST00000491435 481 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 RPL21P16-201ENST00000495531 483 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.16□□□□□ -1.9
KLHL41O60662 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.16□□□□□ -1.9
KLHL41O60662 IGKV2-26-201ENST00000518305 343 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.16□□□□□ -1.9
KLHL41O60662 AC125611.2-201ENST00000551907 647 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 SETP2-201ENST00000553886 926 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.16□□□□□ -1.9
KLHL41O60662 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.16□□□□□ -1.9
KLHL41O60662 AC011260.1-201ENST00000578420 472 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 MIR5004-201ENST00000579078 107 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 MIR4325-201ENST00000583049 90 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 AC012493.2-201ENST00000595083 291 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 U73023.1-201ENST00000603134 700 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 HSPE1P7-201ENST00000604681 321 ntBASIC3.16□□□□□ -1.9
KLHL41O60662 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
KLHL41O60662 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KLHL41O60662 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.15□□□□□ -1.91
KLHL41O60662 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
KLHL41O60662 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
KLHL41O60662 SNORD56.5-201ENST00000364281 72 ntBASIC3.15□□□□□ -1.91
KLHL41O60662 SNORA46-201ENST00000384762 135 ntBASIC3.15□□□□□ -1.91
KLHL41O60662 AL445183.3-201ENST00000414168 502 ntBASIC3.15□□□□□ -1.91
KLHL41O60662 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.15□□□□□ -1.91
KLHL41O60662 AL158050.1-201ENST00000416077 457 ntBASIC3.15□□□□□ -1.91
KLHL41O60662 AL121882.1-201ENST00000422893 417 ntBASIC3.15□□□□□ -1.91
KLHL41O60662 UBBP3-201ENST00000445497 241 ntBASIC3.15□□□□□ -1.91
KLHL41O60662 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.15□□□□□ -1.91
KLHL41O60662 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.15□□□□□ -1.91
KLHL41O60662 AL353718.1-201ENST00000451028 517 ntBASIC3.15□□□□□ -1.91
KLHL41O60662 UQCRHP3-201ENST00000451503 251 ntBASIC3.15□□□□□ -1.91
KLHL41O60662 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.15□□□□□ -1.91
KLHL41O60662 AC006390.1-201ENST00000508068 283 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms