Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.66□□□□□ -1.66
PRPF3O43395 BTF3P5-201ENST00000457252 467 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 MTCO1P42-201ENST00000457379 726 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.66□□□□□ -1.66
PRPF3O43395 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.66□□□□□ -1.66
PRPF3O43395 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.66□□□□□ -1.66
PRPF3O43395 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.66□□□□□ -1.66
PRPF3O43395 ARL2BPP4-201ENST00000506854 471 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.66□□□□□ -1.66
PRPF3O43395 VWA8P1-201ENST00000510889 176 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.66□□□□□ -1.66
PRPF3O43395 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.66□□□□□ -1.66
PRPF3O43395 AP002963.1-201ENST00000530590 184 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
PRPF3O43395 PARP1P2-201ENST00000556806 195 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.66□□□□□ -1.66
PRPF3O43395 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.66□□□□□ -1.66
PRPF3O43395 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.66□□□□□ -1.66
PRPF3O43395 AC068790.5-201ENST00000602741 355 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 AC012557.2-201ENST00000605919 418 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 RNU4-89P-201ENST00000607443 133 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 AC023043.4-201ENST00000612081 449 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.66□□□□□ -1.66
PRPF3O43395 AC026368.1-201ENST00000614934 690 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 AC092656.1-203ENST00000624134 423 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 MTND5P33-201ENST00000571250 1450 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 AC087190.4-201ENST00000574616 8334 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
PRPF3O43395 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF3O43395 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PRPF3O43395 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.65□□□□□ -1.66
PRPF3O43395 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
PRPF3O43395 AL157700.1-201ENST00000561973 1432 ntBASIC4.65□□□□□ -1.66
PRPF3O43395 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.65□□□□□ -1.66
PRPF3O43395 RLIMP1-201ENST00000339626 1680 ntBASIC4.65□□□□□ -1.66
PRPF3O43395 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PRPF3O43395 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
PRPF3O43395 RNA5SP189-201ENST00000364920 115 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 RNU6-809P-201ENST00000384461 107 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 SNORD3H-201ENST00000384486 214 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 SNORA3C-201ENST00000408792 125 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 RNA5SP39-201ENST00000411245 120 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 HMGN1P24-201ENST00000412282 298 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 HMGN1P14-201ENST00000412459 517 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.65□□□□□ -1.67
PRPF3O43395 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.65□□□□□ -1.67
PRPF3O43395 OR5BE1P-201ENST00000425977 939 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 MTND1P28-201ENST00000435623 950 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 MTCO1P19-201ENST00000443487 500 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.65□□□□□ -1.67
PRPF3O43395 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PRPF3O43395 AC114755.5-201ENST00000447760 831 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 RPS11P1-201ENST00000451072 473 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 MTND1P27-201ENST00000451117 902 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.65□□□□□ -1.67
PRPF3O43395 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.65□□□□□ -1.67
PRPF3O43395 AP000873.1-201ENST00000463987 400 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 AC007537.2-201ENST00000472093 511 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 LARP1BP2-201ENST00000486594 519 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 RPL31P61-201ENST00000496160 376 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PRPF3O43395 AC022483.1-201ENST00000514020 567 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.65□□□□□ -1.67
PRPF3O43395 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.65□□□□□ -1.67
PRPF3O43395 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PRPF3O43395 AP002453.2-201ENST00000533503 320 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.65□□□□□ -1.67
PRPF3O43395 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.65□□□□□ -1.67
PRPF3O43395 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.65□□□□□ -1.67
PRPF3O43395 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.65□□□□□ -1.67
PRPF3O43395 AC006362.1-201ENST00000567392 174 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 AC009101.1-201ENST00000568135 242 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.65□□□□□ -1.67
PRPF3O43395 AC034268.2-201ENST00000571784 482 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.65□□□□□ -1.67
PRPF3O43395 AC022146.1-201ENST00000595307 847 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 AC146944.4-201ENST00000602697 718 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 HMGN2P28-201ENST00000606102 262 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 OR10AB1P-201ENST00000609613 938 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 AC122108.2-201ENST00000611946 526 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.65□□□□□ -1.67
PRPF3O43395 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.65□□□□□ -1.67
PRPF3O43395 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.65□□□□□ -1.67
PRPF3O43395 OR5BE1P-202ENST00000641168 1176 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PRPF3O43395 AC092125.1-201ENST00000562568 1995 ntBASIC4.65□□□□□ -1.67
PRPF3O43395 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
PRPF3O43395 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PRPF3O43395 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PRPF3O43395 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.64□□□□□ -1.67
PRPF3O43395 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
PRPF3O43395 RN7SKP44-201ENST00000363602 316 ntBASIC4.64□□□□□ -1.67
PRPF3O43395 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
PRPF3O43395 RNU1-13P-201ENST00000384499 162 ntBASIC4.64□□□□□ -1.67
PRPF3O43395 SNORD116-4-201ENST00000384733 96 ntBASIC4.64□□□□□ -1.67
PRPF3O43395 RNU2-47P-201ENST00000410649 186 ntBASIC4.64□□□□□ -1.67
PRPF3O43395 MTCO2P34-201ENST00000421994 607 ntBASIC4.64□□□□□ -1.67
PRPF3O43395 AC233728.2-201ENST00000425348 757 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms