Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.15□□□□□ -1.91
CDX4O14627 AC092954.1-201ENST00000609121 445 ntBASIC3.15□□□□□ -1.91
CDX4O14627 AC092106.3-201ENST00000611308 722 ntBASIC3.15□□□□□ -1.91
CDX4O14627 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.15□□□□□ -1.91
CDX4O14627 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.15□□□□□ -1.91
CDX4O14627 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CDX4O14627 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.15□□□□□ -1.91
CDX4O14627 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDX4O14627 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDX4O14627 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.15□□□□□ -1.91
CDX4O14627 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
CDX4O14627 AC073073.2-201ENST00000609827 2578 ntBASIC3.14□□□□□ -1.91
CDX4O14627 MTND4P10-201ENST00000446199 1363 ntBASIC3.14□□□□□ -1.91
CDX4O14627 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CDX4O14627 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDX4O14627 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CDX4O14627 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.14□□□□□ -1.91
CDX4O14627 RNU6-1226P-201ENST00000384317 107 ntBASIC3.14□□□□□ -1.91
CDX4O14627 RNY3P9-201ENST00000384727 106 ntBASIC3.14□□□□□ -1.91
CDX4O14627 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.14□□□□□ -1.91
CDX4O14627 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.14□□□□□ -1.91
CDX4O14627 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.14□□□□□ -1.91
CDX4O14627 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.14□□□□□ -1.91
CDX4O14627 GTF2IP23-201ENST00000423746 351 ntBASIC3.14□□□□□ -1.91
CDX4O14627 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.14□□□□□ -1.91
CDX4O14627 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.14□□□□□ -1.91
CDX4O14627 AC005345.1-201ENST00000431868 217 ntBASIC3.14□□□□□ -1.91
CDX4O14627 NANOGP2-201ENST00000435391 727 ntBASIC3.14□□□□□ -1.91
CDX4O14627 AL138799.3-201ENST00000438968 350 ntBASIC3.14□□□□□ -1.91
CDX4O14627 AC093155.1-201ENST00000440164 826 ntBASIC3.14□□□□□ -1.91
CDX4O14627 RPL23AP16-201ENST00000441715 421 ntBASIC3.14□□□□□ -1.91
CDX4O14627 RPL23AP33-201ENST00000442301 452 ntBASIC3.14□□□□□ -1.91
CDX4O14627 AL357552.1-201ENST00000445254 415 ntBASIC3.14□□□□□ -1.91
CDX4O14627 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.14□□□□□ -1.91
CDX4O14627 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.14□□□□□ -1.91
CDX4O14627 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.14□□□□□ -1.91
CDX4O14627 TRBV26-201ENST00000456572 344 ntBASIC3.14□□□□□ -1.91
CDX4O14627 MTCO3P2-201ENST00000457365 171 ntBASIC3.14□□□□□ -1.91
CDX4O14627 RPL9P32-201ENST00000464118 620 ntBASIC3.14□□□□□ -1.91
CDX4O14627 AC069499.1-201ENST00000489433 509 ntBASIC3.14□□□□□ -1.91
CDX4O14627 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.14□□□□□ -1.91
CDX4O14627 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.14□□□□□ -1.91
CDX4O14627 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.14□□□□□ -1.91
CDX4O14627 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDX4O14627 AC103783.1-201ENST00000520506 373 ntBASIC3.14□□□□□ -1.91
CDX4O14627 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.14□□□□□ -1.91
CDX4O14627 OR4A45P-201ENST00000529954 901 ntBASIC3.14□□□□□ -1.91
CDX4O14627 MTND4P33-201ENST00000556706 766 ntBASIC3.14□□□□□ -1.91
CDX4O14627 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.14□□□□□ -1.91
CDX4O14627 AC023813.2-201ENST00000564321 469 ntBASIC3.14□□□□□ -1.91
CDX4O14627 AC145350.1-201ENST00000567426 208 ntBASIC3.14□□□□□ -1.91
CDX4O14627 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.14□□□□□ -1.91
CDX4O14627 AC015917.1-201ENST00000579654 510 ntBASIC3.14□□□□□ -1.91
CDX4O14627 AC015688.2-201ENST00000584523 262 ntBASIC3.14□□□□□ -1.91
CDX4O14627 AC103881.1-201ENST00000603476 538 ntBASIC3.14□□□□□ -1.91
CDX4O14627 AC025588.2-201ENST00000604851 466 ntBASIC3.14□□□□□ -1.91
CDX4O14627 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.14□□□□□ -1.91
CDX4O14627 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.14□□□□□ -1.91
CDX4O14627 AC022509.4-201ENST00000621404 572 ntBASIC3.14□□□□□ -1.91
CDX4O14627 AP003485.2-201ENST00000623636 610 ntBASIC3.14□□□□□ -1.91
CDX4O14627 AL359757.2-201ENST00000624309 274 ntBASIC3.14□□□□□ -1.91
CDX4O14627 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.14□□□□□ -1.91
CDX4O14627 AC117529.2-201ENST00000512159 2068 ntBASIC3.14□□□□□ -1.91
CDX4O14627 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CDX4O14627 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.14□□□□□ -1.91
CDX4O14627 MTND5P3-201ENST00000438536 1800 ntBASIC3.14□□□□□ -1.91
CDX4O14627 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDX4O14627 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.14□□□□□ -1.91
CDX4O14627 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.14□□□□□ -1.91
CDX4O14627 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDX4O14627 PABPC1P7-201ENST00000413177 1513 ntBASIC3.14□□□□□ -1.91
CDX4O14627 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDX4O14627 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDX4O14627 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDX4O14627 SNORA54-201ENST00000384281 123 ntBASIC3.13□□□□□ -1.91
CDX4O14627 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CDX4O14627 AL136133.1-201ENST00000413694 376 ntBASIC3.13□□□□□ -1.91
CDX4O14627 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.13□□□□□ -1.91
CDX4O14627 AC092634.6-201ENST00000418558 192 ntBASIC3.13□□□□□ -1.91
CDX4O14627 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.13□□□□□ -1.91
CDX4O14627 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.13□□□□□ -1.91
CDX4O14627 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.13□□□□□ -1.91
CDX4O14627 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.13□□□□□ -1.91
CDX4O14627 MTND2P22-201ENST00000444325 1033 ntBASIC3.13□□□□□ -1.91
CDX4O14627 MTCO1P48-201ENST00000448024 1096 ntBASIC3.13□□□□□ -1.91
CDX4O14627 COX6CP18-201ENST00000448769 222 ntBASIC3.13□□□□□ -1.91
CDX4O14627 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.13□□□□□ -1.91
CDX4O14627 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDX4O14627 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDX4O14627 AC084024.2-201ENST00000503480 791 ntBASIC3.13□□□□□ -1.91
CDX4O14627 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.13□□□□□ -1.91
CDX4O14627 AC091951.3-201ENST00000504093 246 ntBASIC3.13□□□□□ -1.91
CDX4O14627 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.13□□□□□ -1.91
CDX4O14627 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.13□□□□□ -1.91
CDX4O14627 MTCYBP16-201ENST00000509187 1129 ntBASIC3.13□□□□□ -1.91
CDX4O14627 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.13□□□□□ -1.91
CDX4O14627 AC091826.1-201ENST00000514065 313 ntBASIC3.13□□□□□ -1.91
CDX4O14627 RNU2-58P-201ENST00000516403 183 ntBASIC3.13□□□□□ -1.91
CDX4O14627 SNORA48.10-201ENST00000516965 160 ntBASIC3.13□□□□□ -1.91
CDX4O14627 IGKV2D-23-201ENST00000518179 286 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms