Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 RNU6-374P-201ENST00000364146 108 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 RNU4-28P-201ENST00000364739 141 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 RNU6-621P-201ENST00000364752 109 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 RNU6-83P-201ENST00000384568 112 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 SNORA48.5-201ENST00000391143 135 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 EI24P2-201ENST00000397776 1076 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 RNU4-47P-201ENST00000410876 114 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AC096664.2-201ENST00000411843 406 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AIMP1P1-201ENST00000418670 937 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AL035410.1-201ENST00000427409 427 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 MTCYBP31-201ENST00000438855 1122 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 FGF7P5-201ENST00000441829 291 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 ATP5C1P1-201ENST00000441945 895 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 OFD1P3Y-201ENST00000453312 783 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 RPL21P134-201ENST00000453468 483 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AC092757.1-201ENST00000467293 467 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AC109925.1-201ENST00000478069 331 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AC108078.3-201ENST00000502633 489 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 NBEAP1-201ENST00000554452 979 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 MIR4425-201ENST00000580572 84 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AC025588.3-201ENST00000604182 274 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AC080013.3-201ENST00000606839 578 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AL513477.2-201ENST00000607858 568 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AC007349.4-201ENST00000608114 532 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AC090116.1-201ENST00000615679 446 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AC231759.1-201ENST00000616455 597 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AC109809.1-201ENST00000619665 545 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AC092650.2-201ENST00000619984 902 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AC092184.1-201ENST00000625042 715 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AC017071.1-201ENST00000564407 2204 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 AC138915.3-201ENST00000562908 1389 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 MTND5P3-201ENST00000438536 1800 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 AF127577.6-201ENST00000623352 2191 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 MIR184-201ENST00000384962 84 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 EIF5P1-201ENST00000400019 1231 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 MTND4LP20-201ENST00000402379 270 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 RPL22P18-201ENST00000417197 377 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 MTCYBP24-201ENST00000420387 1106 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 FNDC3CP-201ENST00000420795 1155 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 RPL23AP82-202ENST00000427528 469 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 MTND2P20-201ENST00000440805 661 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 VN1R10P-201ENST00000447106 875 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 MTCYBP11-201ENST00000447254 1109 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 RPL12P26-201ENST00000452430 487 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 TRGVB-201ENST00000453257 471 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 NECAP1P2-201ENST00000455668 727 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 CENPBD1P1-201ENST00000464061 469 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 RPS3AP43-201ENST00000479743 781 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 AC092451.1-201ENST00000480211 153 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 OR4G11P-201ENST00000492842 939 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 AC091951.3-201ENST00000504093 246 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 AC021146.8-201ENST00000507455 733 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 AC116353.3-201ENST00000511215 249 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 RN7SKP60-201ENST00000516985 239 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 AC011471.1-201ENST00000585766 187 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms