Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC010631.1-201ENST00000474150 156 ntBASIC4.72□□□□□ -1.65
SHISA3A0PJX4 RN7SL814P-201ENST00000487715 300 ntBASIC4.72□□□□□ -1.65
SHISA3A0PJX4 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 AC116655.1-201ENST00000508324 901 ntBASIC4.72□□□□□ -1.65
SHISA3A0PJX4 AC021146.3-201ENST00000511911 260 ntBASIC4.72□□□□□ -1.65
SHISA3A0PJX4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 Y_RNA.661-201ENST00000516003 99 ntBASIC4.72□□□□□ -1.65
SHISA3A0PJX4 SCARNA18.1-201ENST00000516330 83 ntBASIC4.72□□□□□ -1.65
SHISA3A0PJX4 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 GNAI2P1-201ENST00000541815 315 ntBASIC4.72□□□□□ -1.65
SHISA3A0PJX4 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 MIR4472-2-201ENST00000582069 67 ntBASIC4.72□□□□□ -1.65
SHISA3A0PJX4 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 AL442067.1-201ENST00000613261 223 ntBASIC4.72□□□□□ -1.65
SHISA3A0PJX4 AL359547.2-201ENST00000615810 418 ntBASIC4.72□□□□□ -1.65
SHISA3A0PJX4 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 AL596275.2-204ENST00000641628 552 ntBASIC4.72□□□□□ -1.65
SHISA3A0PJX4 AL596275.2-206ENST00000641957 626 ntBASIC4.72□□□□□ -1.65
SHISA3A0PJX4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 AC107027.3-201ENST00000565095 3473 ntBASIC4.72□□□□□ -1.65
SHISA3A0PJX4 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
SHISA3A0PJX4 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC4.71□□□□□ -1.65
SHISA3A0PJX4 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SHISA3A0PJX4 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SHISA3A0PJX4 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SHISA3A0PJX4 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHISA3A0PJX4 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
SHISA3A0PJX4 AC104966.1-201ENST00000467010 1464 ntBASIC4.71□□□□□ -1.66
SHISA3A0PJX4 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHISA3A0PJX4 AC104623.2-202ENST00000623477 4002 ntBASIC4.71□□□□□ -1.66
SHISA3A0PJX4 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHISA3A0PJX4 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SHISA3A0PJX4 RNU1-150P-201ENST00000362491 162 ntBASIC4.71□□□□□ -1.66
SHISA3A0PJX4 RNU6-989P-201ENST00000362756 107 ntBASIC4.71□□□□□ -1.66
SHISA3A0PJX4 RNU6-249P-201ENST00000363016 102 ntBASIC4.71□□□□□ -1.66
SHISA3A0PJX4 RNU6-715P-201ENST00000365204 103 ntBASIC4.71□□□□□ -1.66
SHISA3A0PJX4 AC013442.1-201ENST00000397347 228 ntBASIC4.71□□□□□ -1.66
SHISA3A0PJX4 MIR1282-201ENST00000408865 101 ntBASIC4.71□□□□□ -1.66
SHISA3A0PJX4 Y_RNA.594-201ENST00000410373 140 ntBASIC4.71□□□□□ -1.66
SHISA3A0PJX4 MTND6P12-201ENST00000428247 522 ntBASIC4.71□□□□□ -1.66
SHISA3A0PJX4 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.71□□□□□ -1.66
SHISA3A0PJX4 PSMA2P3-201ENST00000429685 675 ntBASIC4.71□□□□□ -1.66
SHISA3A0PJX4 RPL12P11-201ENST00000439970 501 ntBASIC4.71□□□□□ -1.66
SHISA3A0PJX4 U8.20-201ENST00000459445 131 ntBASIC4.71□□□□□ -1.66
SHISA3A0PJX4 RPS3AP41-201ENST00000462701 778 ntBASIC4.71□□□□□ -1.66
SHISA3A0PJX4 AC098847.1-201ENST00000473094 348 ntBASIC4.71□□□□□ -1.66
SHISA3A0PJX4 AP001086.1-201ENST00000494882 321 ntBASIC4.71□□□□□ -1.66
SHISA3A0PJX4 TBCAP3-201ENST00000512475 312 ntBASIC4.71□□□□□ -1.66
SHISA3A0PJX4 RNU6-470P-201ENST00000515954 104 ntBASIC4.71□□□□□ -1.66
SHISA3A0PJX4 Y_RNA.670-201ENST00000516255 105 ntBASIC4.71□□□□□ -1.66
SHISA3A0PJX4 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.71□□□□□ -1.66
SHISA3A0PJX4 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.71□□□□□ -1.66
SHISA3A0PJX4 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.71□□□□□ -1.66
SHISA3A0PJX4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.71□□□□□ -1.66
SHISA3A0PJX4 MIR4310-201ENST00000582950 57 ntBASIC4.71□□□□□ -1.66
SHISA3A0PJX4 MIR3936-201ENST00000584304 110 ntBASIC4.71□□□□□ -1.66
SHISA3A0PJX4 AC073539.2-201ENST00000597113 165 ntBASIC4.71□□□□□ -1.66
SHISA3A0PJX4 AC006363.1-201ENST00000603806 463 ntBASIC4.71□□□□□ -1.66
SHISA3A0PJX4 AL034351.1-201ENST00000605288 668 ntBASIC4.71□□□□□ -1.66
SHISA3A0PJX4 AC092266.1-201ENST00000610958 165 ntBASIC4.71□□□□□ -1.66
SHISA3A0PJX4 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SHISA3A0PJX4 MIR6861-201ENST00000618657 64 ntBASIC4.71□□□□□ -1.66
SHISA3A0PJX4 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHISA3A0PJX4 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHISA3A0PJX4 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.71□□□□□ -1.66
SHISA3A0PJX4 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHISA3A0PJX4 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SHISA3A0PJX4 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHISA3A0PJX4 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SHISA3A0PJX4 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHISA3A0PJX4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHISA3A0PJX4 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHISA3A0PJX4 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 UBBP2-201ENST00000376781 231 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 Y_RNA.404-201ENST00000383978 102 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 RNU6-701P-201ENST00000384059 107 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 Y_RNA.476-201ENST00000384347 108 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms