Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 AC017037.2-201ENST00000513850 890 ntBASIC3.23□□□□□ -1.89
TRBV5-5A0A0J9YX44 RNU2-58P-201ENST00000516403 183 ntBASIC3.23□□□□□ -1.89
TRBV5-5A0A0J9YX44 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.23□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.23□□□□□ -1.89
TRBV5-5A0A0J9YX44 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.23□□□□□ -1.89
TRBV5-5A0A0J9YX44 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.23□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.23□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC034268.2-201ENST00000571784 482 ntBASIC3.23□□□□□ -1.89
TRBV5-5A0A0J9YX44 AP000403.1-201ENST00000603349 851 ntBASIC3.23□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC006254.3-201ENST00000603353 884 ntBASIC3.23□□□□□ -1.89
TRBV5-5A0A0J9YX44 AL590229.1-201ENST00000603497 542 ntBASIC3.23□□□□□ -1.89
TRBV5-5A0A0J9YX44 Z94722.1-201ENST00000604328 474 ntBASIC3.23□□□□□ -1.89
TRBV5-5A0A0J9YX44 BCRP9-201ENST00000605312 388 ntBASIC3.23□□□□□ -1.89
TRBV5-5A0A0J9YX44 ARF4P1-201ENST00000605447 541 ntBASIC3.23□□□□□ -1.89
TRBV5-5A0A0J9YX44 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.23□□□□□ -1.89
TRBV5-5A0A0J9YX44 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRBV5-5A0A0J9YX44 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.23□□□□□ -1.89
TRBV5-5A0A0J9YX44 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.23□□□□□ -1.89
TRBV5-5A0A0J9YX44 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.23□□□□□ -1.89
TRBV5-5A0A0J9YX44 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRBV5-5A0A0J9YX44 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRBV5-5A0A0J9YX44 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.23□□□□□ -1.89
TRBV5-5A0A0J9YX44 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.23□□□□□ -1.89
TRBV5-5A0A0J9YX44 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.23□□□□□ -1.89
TRBV5-5A0A0J9YX44 PABPC1P9-201ENST00000426076 1612 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC012321.1-201ENST00000561622 1588 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC103591.2-201ENST00000265259 766 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AL136116.1-201ENST00000403591 381 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 RN7SKP285-201ENST00000410137 318 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 RPL21P66-201ENST00000426566 466 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 UBE2V1P13-201ENST00000436983 439 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AL138799.3-201ENST00000438968 350 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 FAM103A2P-201ENST00000444122 354 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 RPL7P36-201ENST00000444633 681 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 BMI1P1-201ENST00000445879 941 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 NUTF2P3-201ENST00000448540 384 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 RPS27AP8-201ENST00000452665 445 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC104308.1-201ENST00000454621 333 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC004062.1-201ENST00000509926 645 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 OR5BM1P-201ENST00000512021 366 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 RNU6-528P-201ENST00000516926 100 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 RNU6-1073P-201ENST00000517182 106 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC022695.1-201ENST00000522089 237 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AP006245.1-201ENST00000522549 120 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC135001.1-201ENST00000544546 283 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 SETP2-201ENST00000553886 926 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC091489.2-201ENST00000566263 604 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 MIR4307-201ENST00000582802 84 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC022916.3-201ENST00000592961 742 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC010620.1-201ENST00000601088 1102 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AL592436.1-201ENST00000605135 558 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 MIR6867-201ENST00000610636 67 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC079597.1-201ENST00000624306 508 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC091965.5-201ENST00000624785 342 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 RLIMP1-201ENST00000339626 1680 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AL645937.1-201ENST00000641739 1652 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 MTCO1P9-201ENST00000505577 1534 ntBASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms