Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 AC006463.2-201ENST00000473326 348 ntBASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 RPL36AP51-201ENST00000487216 318 ntBASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 NRON-201ENST00000517270 370 ntBASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 HMGB1P41-201ENST00000520234 440 ntBASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 FAM60DP-201ENST00000524174 632 ntBASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 PDCD5P1-201ENST00000543528 309 ntBASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC128657.1-201ENST00000549459 145 ntBASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC125611.2-201ENST00000551907 647 ntBASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 AL121579.1-201ENST00000555129 305 ntBASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 HMGB1P6-201ENST00000569046 646 ntBASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 CYCSP40-201ENST00000575927 294 ntBASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 RN7SL652P-201ENST00000577769 300 ntBASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 MIR4293-201ENST00000584305 78 ntBASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC234771.5-201ENST00000600161 514 ntBASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 AL121992.2-201ENST00000606262 256 ntBASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 AL020991.1-201ENST00000612314 373 ntBASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 MIR8069-1-201ENST00000616627 86 ntBASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 MIR8069-2-201ENST00000621412 86 ntBASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC244100.1-202ENST00000621554 382 ntBASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 AP000346.3-201ENST00000622821 210 ntBASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.4□□□□□ -1.87
IGHV4-28A0A0C4DH34 AL645937.1-201ENST00000641739 1652 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 HSPE1P11-201ENST00000339579 310 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 Y_RNA.367-201ENST00000365544 101 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 MIR558-201ENST00000384920 94 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 Z98745.1-201ENST00000402553 494 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 AL136372.1-201ENST00000403060 228 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 AL591416.1-201ENST00000404015 867 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 RN7SKP285-201ENST00000410137 318 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC009237.5-201ENST00000414271 501 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 RPS7P15-201ENST00000415804 584 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 MTCO3P12-201ENST00000416718 547 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC140479.3-201ENST00000418944 1126 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 RPL30P16-201ENST00000419341 429 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 E2F6P2-201ENST00000420708 748 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 RPL36AP10-201ENST00000421785 322 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC016696.1-201ENST00000446949 318 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC114755.5-201ENST00000447760 831 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC083798.1-201ENST00000472671 131 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC020890.1-201ENST00000491837 504 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 HSPD1P15-201ENST00000505573 1122 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 RNA5SP249-201ENST00000516127 99 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 RNU2-10P-201ENST00000516375 211 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 RNU7-51P-201ENST00000516560 62 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC123904.3-201ENST00000547218 814 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 AL121603.1-201ENST00000553815 142 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC087477.6-201ENST00000559595 843 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC008752.3-201ENST00000588113 712 ntBASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.39□□□□□ -1.87
IGHV4-28A0A0C4DH34 AL034351.1-201ENST00000605288 668 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms