Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 AP004242.1-201ENST00000533701 349 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 AC023161.2-201ENST00000551218 780 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 GTF2IP22-201ENST00000554443 182 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 AC012414.6-201ENST00000568241 401 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 AC012435.1-202ENST00000568772 240 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 AC119751.7-201ENST00000600494 245 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 RN7SKP299-201ENST00000606679 301 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 AC106028.5-201ENST00000610332 395 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 MIR486-1-201ENST00000612171 68 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 MAPK10-373ENST00000641983 6772 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.96□□□□□ -1.77
SNX9Q9Y5X1 OR5BR1P-201ENST00000524992 1330 ntBASIC3.96□□□□□ -1.77
SNX9Q9Y5X1 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.96□□□□□ -1.77
SNX9Q9Y5X1 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
SNX9Q9Y5X1 AC092104.1-201ENST00000497346 1441 ntBASIC3.96□□□□□ -1.77
SNX9Q9Y5X1 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 RNU6-374P-201ENST00000364146 108 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 RNA5SP51-201ENST00000364750 119 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 SNORA73.2-201ENST00000364946 201 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 Y_RNA.302-201ENST00000364997 102 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 SNORA5A-201ENST00000384111 134 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 AL590399.6-201ENST00000446396 307 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 AP000936.2-201ENST00000447151 681 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 RPL23AP35-201ENST00000451906 501 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 USP9YP10-201ENST00000454868 628 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 AL136097.1-201ENST00000456945 913 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 ARPC3P2-201ENST00000457786 533 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 RPL7P15-201ENST00000461190 712 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 RPL30P9-201ENST00000465586 330 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 AC022034.3-201ENST00000471393 478 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 RPL21P129-201ENST00000491732 478 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 OR4G11P-201ENST00000492842 939 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 AP002812.1-201ENST00000495378 474 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 RPL7P47-201ENST00000497299 556 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 AC004069.2-201ENST00000505438 1114 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 AC005921.1-201ENST00000510589 286 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 AC006499.2-201ENST00000513470 337 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 AC010342.1-201ENST00000514047 877 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 RNA5SP143-201ENST00000516936 115 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 AP003033.1-201ENST00000527244 415 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 CYCSP2-201ENST00000558168 301 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 AC136618.2-201ENST00000575091 400 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 AL596327.1-201ENST00000603629 213 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 MTCYBP22-201ENST00000603788 447 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 HSPE1P14-201ENST00000605812 302 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 AC090425.2-201ENST00000608818 501 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 MIR7844-201ENST00000616161 122 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 AC119674.1-207ENST00000641355 633 ntBASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SNX9Q9Y5X1 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 Y_RNA.18-201ENST00000362461 102 ntBASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 RNU6-660P-201ENST00000364566 109 ntBASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 MIR200C-201ENST00000384980 68 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms