Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 AC006077.1-201ENST00000604746 343 ntBASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 AC024255.1-201ENST00000614376 102 ntBASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 CYP4F35P-202ENST00000636121 390 ntBASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 AC023245.2-201ENST00000530760 2978 ntBASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 CASC19-246ENST00000641625 1606 ntBASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 RNU4-90P-201ENST00000362773 141 ntBASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 RNU6-14P-201ENST00000384630 106 ntBASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 GCNT1P4-201ENST00000404096 329 ntBASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 U3.35-201ENST00000408405 208 ntBASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 EI24P1-201ENST00000416584 867 ntBASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 AL031736.2-201ENST00000426573 787 ntBASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 AP001324.2-201ENST00000461163 319 ntBASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 AC114728.1-201ENST00000488289 483 ntBASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 AP006245.1-201ENST00000522549 120 ntBASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 AC007494.1-201ENST00000562293 760 ntBASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 LRRC37A5P-203ENST00000580181 585 ntBASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 MTND1P7-201ENST00000632801 297 ntBASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDHB3Q9Y5E6 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PCDHB3Q9Y5E6 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PCDHB3Q9Y5E6 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.15□□□□□ -1.43
PCDHB3Q9Y5E6 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.15□□□□□ -1.43
PCDHB3Q9Y5E6 DDX10P1-201ENST00000448545 1933 ntBASIC6.15□□□□□ -1.43
PCDHB3Q9Y5E6 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PCDHB3Q9Y5E6 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
PCDHB3Q9Y5E6 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 RNU1-59P-201ENST00000364829 162 ntBASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 Y_RNA.358-201ENST00000365491 99 ntBASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 Y_RNA.568-201ENST00000384742 113 ntBASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 RNU6-651P-201ENST00000411040 105 ntBASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 AC245884.2-201ENST00000426257 404 ntBASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 FTLP19-201ENST00000433300 394 ntBASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 ELOCP18-201ENST00000434209 337 ntBASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 AL360271.2-201ENST00000447710 161 ntBASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 RNU6-1219P-201ENST00000516143 112 ntBASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 MDM2-232ENST00000544561 213 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 U1.25-201ENST00000614085 162 ntBASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
PCDHB3Q9Y5E6 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms