Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 Y_RNA.122-201ENST00000363331 96 ntBASIC3.22□□□□□ -1.89
SHANK2Q9UPX8 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.22□□□□□ -1.89
SHANK2Q9UPX8 AP001521.1-201ENST00000609150 300 ntBASIC3.22□□□□□ -1.89
SHANK2Q9UPX8 OR1S1-201ENST00000624470 978 ntBASIC3.22□□□□□ -1.89
SHANK2Q9UPX8 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.22□□□□□ -1.89
SHANK2Q9UPX8 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHANK2Q9UPX8 MIR337-201ENST00000362281 93 ntBASIC3.22□□□□□ -1.89
SHANK2Q9UPX8 SNORA11.4-201ENST00000408823 129 ntBASIC3.22□□□□□ -1.89
SHANK2Q9UPX8 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.22□□□□□ -1.89
SHANK2Q9UPX8 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.22□□□□□ -1.89
SHANK2Q9UPX8 ATG10-AS1-201ENST00000504846 648 ntBASIC3.22□□□□□ -1.89
SHANK2Q9UPX8 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.22□□□□□ -1.89
SHANK2Q9UPX8 AK6P1-201ENST00000540219 478 ntBASIC3.22□□□□□ -1.89
SHANK2Q9UPX8 AC126177.3-201ENST00000551839 688 ntBASIC3.22□□□□□ -1.89
SHANK2Q9UPX8 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.22□□□□□ -1.89
SHANK2Q9UPX8 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SHANK2Q9UPX8 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.21□□□□□ -1.9
SHANK2Q9UPX8 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.21□□□□□ -1.9
SHANK2Q9UPX8 RPL39P40-201ENST00000445481 146 ntBASIC3.21□□□□□ -1.9
SHANK2Q9UPX8 AL118520.1-201ENST00000450770 291 ntBASIC3.21□□□□□ -1.9
SHANK2Q9UPX8 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.21□□□□□ -1.9
SHANK2Q9UPX8 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.21□□□□□ -1.9
SHANK2Q9UPX8 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.21□□□□□ -1.9
SHANK2Q9UPX8 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.21□□□□□ -1.9
SHANK2Q9UPX8 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SHANK2Q9UPX8 MTND5P12-201ENST00000502851 1449 ntBASIC3.2□□□□□ -1.9
SHANK2Q9UPX8 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SHANK2Q9UPX8 RNY1P10-201ENST00000363268 113 ntBASIC3.2□□□□□ -1.9
SHANK2Q9UPX8 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.2□□□□□ -1.9
SHANK2Q9UPX8 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SHANK2Q9UPX8 RNU6-1140P-201ENST00000410517 106 ntBASIC3.2□□□□□ -1.9
SHANK2Q9UPX8 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.2□□□□□ -1.9
SHANK2Q9UPX8 RPS27P5-201ENST00000444247 244 ntBASIC3.2□□□□□ -1.9
SHANK2Q9UPX8 RPL38P4-201ENST00000502376 214 ntBASIC3.2□□□□□ -1.9
SHANK2Q9UPX8 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.2□□□□□ -1.9
SHANK2Q9UPX8 VN1R80P-201ENST00000597126 338 ntBASIC3.2□□□□□ -1.9
SHANK2Q9UPX8 AP004372.1-201ENST00000604842 844 ntBASIC3.2□□□□□ -1.9
SHANK2Q9UPX8 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.2□□□□□ -1.9
SHANK2Q9UPX8 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 FGF7P8-201ENST00000402994 292 ntBASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 AL590084.1-201ENST00000407885 387 ntBASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 LUZP4P1-201ENST00000415420 344 ntBASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 NDUFB4P6-201ENST00000436819 366 ntBASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 AC004866.2-201ENST00000438285 481 ntBASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 AC055855.1-201ENST00000489563 579 ntBASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 CCNHP1-201ENST00000513311 678 ntBASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 AL670379.6-201ENST00000603753 252 ntBASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 AL670379.11-201ENST00000604059 253 ntBASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 AL670379.10-201ENST00000604330 253 ntBASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 AC008162.1-201ENST00000604718 254 ntBASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 AL670379.1-201ENST00000604752 252 ntBASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 AL670379.2-201ENST00000604983 252 ntBASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 AL670379.5-201ENST00000605253 252 ntBASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 AL670379.4-201ENST00000605279 254 ntBASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 AL670379.12-201ENST00000605291 253 ntBASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 AL670379.8-201ENST00000605353 252 ntBASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 AL670379.9-201ENST00000605428 253 ntBASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 AL670379.7-201ENST00000605823 252 ntBASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 AC016542.2-201ENST00000624201 619 ntBASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 CU459211.1-201ENST00000635667 749 ntBASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHANK2Q9UPX8 AL035551.1-201ENST00000446931 348 ntBASIC3.18□□□□□ -1.9
SHANK2Q9UPX8 AP000705.1-201ENST00000454567 350 ntBASIC3.18□□□□□ -1.9
SHANK2Q9UPX8 RNA5SP309-201ENST00000516670 106 ntBASIC3.18□□□□□ -1.9
SHANK2Q9UPX8 AC245517.5-201ENST00000611529 162 ntBASIC3.18□□□□□ -1.9
SHANK2Q9UPX8 AC093909.5-201ENST00000621839 1799 ntBASIC3.18□□□□□ -1.9
SHANK2Q9UPX8 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SHANK2Q9UPX8 MIR378A-201ENST00000362177 66 ntBASIC3.17□□□□□ -1.9
SHANK2Q9UPX8 SNORA25.9-201ENST00000365087 128 ntBASIC3.17□□□□□ -1.9
SHANK2Q9UPX8 SAR1AP2-201ENST00000392696 594 ntBASIC3.17□□□□□ -1.9
SHANK2Q9UPX8 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.17□□□□□ -1.9
SHANK2Q9UPX8 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.17□□□□□ -1.9
SHANK2Q9UPX8 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.17□□□□□ -1.9
SHANK2Q9UPX8 MTCO1P42-201ENST00000457379 726 ntBASIC3.17□□□□□ -1.9
SHANK2Q9UPX8 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.17□□□□□ -1.9
SHANK2Q9UPX8 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.17□□□□□ -1.9
SHANK2Q9UPX8 MIR3670-2-201ENST00000582974 65 ntBASIC3.17□□□□□ -1.9
SHANK2Q9UPX8 MIR3670-1-201ENST00000584160 65 ntBASIC3.17□□□□□ -1.9
SHANK2Q9UPX8 MIR3670-3-201ENST00000584855 65 ntBASIC3.17□□□□□ -1.9
SHANK2Q9UPX8 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.17□□□□□ -1.9
SHANK2Q9UPX8 MIR3670-4-201ENST00000612260 65 ntBASIC3.17□□□□□ -1.9
SHANK2Q9UPX8 XIST_intron.1-201ENST00000619444 68 ntBASIC3.17□□□□□ -1.9
SHANK2Q9UPX8 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHANK2Q9UPX8 AL355578.1-201ENST00000607405 1328 ntBASIC3.17□□□□□ -1.9
SHANK2Q9UPX8 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.17□□□□□ -1.9
SHANK2Q9UPX8 RNU1-51P-201ENST00000365345 176 ntBASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 RNU6-178P-201ENST00000384631 104 ntBASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 PTP4A1P1-201ENST00000420539 515 ntBASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms