Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 AC096644.4-201ENST00000563417 2912 ntBASIC3.18□□□□□ -1.9
UBQLN1Q9UMX0 AC117529.2-201ENST00000512159 2068 ntBASIC3.18□□□□□ -1.9
UBQLN1Q9UMX0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
UBQLN1Q9UMX0 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.18□□□□□ -1.9
UBQLN1Q9UMX0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
UBQLN1Q9UMX0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 RNU6-582P-201ENST00000362989 107 ntBASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 RNU6-335P-201ENST00000364563 113 ntBASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 RNU6-921P-201ENST00000384361 107 ntBASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 AL079342.2-201ENST00000403367 482 ntBASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 RPL7P8-201ENST00000411964 730 ntBASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 HMGB3P23-201ENST00000414981 585 ntBASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 AC007390.1-201ENST00000415722 356 ntBASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 RPS27P29-201ENST00000463110 252 ntBASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 RN7SL633P-201ENST00000488974 297 ntBASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 HMGB3P15-201ENST00000507326 574 ntBASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 AC104057.1-201ENST00000515547 497 ntBASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 RNU6-885P-201ENST00000516607 104 ntBASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 MTCYBP41-201ENST00000528913 1123 ntBASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 AC015871.2-201ENST00000603605 948 ntBASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 AC069431.2-201ENST00000604149 1099 ntBASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 AC073387.2-201ENST00000604797 784 ntBASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 AC024933.1-201ENST00000608472 348 ntBASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 AC098679.5-201ENST00000624394 571 ntBASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 AL137790.1-201ENST00000634283 177 ntBASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 AP001148.1-201ENST00000624124 2359 ntBASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 AL355578.1-201ENST00000607405 1328 ntBASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
UBQLN1Q9UMX0 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 DBF4P1-201ENST00000412976 1892 ntBASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 RNU6-115P-201ENST00000364310 107 ntBASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 RNU6-707P-201ENST00000364647 95 ntBASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 RNU6-1226P-201ENST00000384317 107 ntBASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 AL121978.1-201ENST00000402778 359 ntBASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 AL138880.1-201ENST00000405824 642 ntBASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 MTND4P3-201ENST00000417829 541 ntBASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 RPL31P54-201ENST00000429803 370 ntBASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 MTCYBP31-201ENST00000438855 1122 ntBASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 NPM1P13-201ENST00000452663 865 ntBASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 AC021146.5-201ENST00000503544 545 ntBASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 SNORA19.3-201ENST00000516165 130 ntBASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 AC074051.3-201ENST00000570238 358 ntBASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 OR4G1P-201ENST00000588632 938 ntBASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 BNIP3P39-201ENST00000601077 554 ntBASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 AC112220.2-201ENST00000605513 533 ntBASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 XIST_intron.1-201ENST00000619444 68 ntBASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 AL157770.1-201ENST00000623049 439 ntBASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 AC087821.2-201ENST00000637086 450 ntBASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 AL445984.1-201ENST00000637834 659 ntBASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 AC092326.2-201ENST00000624772 1561 ntBASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
UBQLN1Q9UMX0 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.15□□□□□ -1.9
UBQLN1Q9UMX0 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
UBQLN1Q9UMX0 ZNF37BP-203ENST00000452306 1352 ntBASIC3.15□□□□□ -1.9
UBQLN1Q9UMX0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
UBQLN1Q9UMX0 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
UBQLN1Q9UMX0 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.15□□□□□ -1.91
UBQLN1Q9UMX0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.15□□□□□ -1.91
UBQLN1Q9UMX0 RNU6-251P-201ENST00000363235 104 ntBASIC3.15□□□□□ -1.91
UBQLN1Q9UMX0 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
UBQLN1Q9UMX0 U3.26-201ENST00000391236 204 ntBASIC3.15□□□□□ -1.91
UBQLN1Q9UMX0 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
UBQLN1Q9UMX0 FCF1P2-201ENST00000415284 583 ntBASIC3.15□□□□□ -1.91
UBQLN1Q9UMX0 TOMM22P1-201ENST00000418578 312 ntBASIC3.15□□□□□ -1.91
UBQLN1Q9UMX0 GTF2IP3-201ENST00000433887 494 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms