Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 AC083843.3-201ENST00000623679 2186 ntBASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 AC116667.1-201ENST00000604855 2072 ntBASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 RNU4-44P-201ENST00000363050 141 ntBASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 RNA5SP123-201ENST00000363244 119 ntBASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 Y_RNA.128-201ENST00000363391 112 ntBASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 Y_RNA.132-201ENST00000363421 102 ntBASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 RNU6-960P-201ENST00000364056 120 ntBASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 Y_RNA.339-201ENST00000365325 102 ntBASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 AC019155.1-201ENST00000382242 574 ntBASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 RNU6-43P-201ENST00000384302 107 ntBASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 RPL35AP22-201ENST00000436855 335 ntBASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 AC005008.1-201ENST00000456151 612 ntBASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 HMGB1P25-201ENST00000468402 607 ntBASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 AC135721.1-201ENST00000497954 479 ntBASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 AC005798.1-201ENST00000513715 387 ntBASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 SNORA25.17-201ENST00000517184 124 ntBASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 FAM60DP-201ENST00000524174 632 ntBASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 BNIP3P1-201ENST00000547295 580 ntBASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 AL118558.2-201ENST00000556294 238 ntBASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 AC234771.5-201ENST00000600161 514 ntBASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 AC104687.2-201ENST00000604442 342 ntBASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 AL133215.3-201ENST00000609801 448 ntBASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 SCARNA15-201ENST00000607520 4325 ntBASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 AC004817.4-201ENST00000602396 3625 ntBASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.41□□□□□ -1.7
CDC42EP3Q9UKI2 MTND4P27-201ENST00000450813 1354 ntBASIC4.4□□□□□ -1.7
CDC42EP3Q9UKI2 BTBD10P1-201ENST00000549824 1352 ntBASIC4.4□□□□□ -1.7
CDC42EP3Q9UKI2 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDC42EP3Q9UKI2 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.4□□□□□ -1.7
CDC42EP3Q9UKI2 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.4□□□□□ -1.7
CDC42EP3Q9UKI2 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
CDC42EP3Q9UKI2 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
CDC42EP3Q9UKI2 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDC42EP3Q9UKI2 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.7
CDC42EP3Q9UKI2 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.4□□□□□ -1.7
CDC42EP3Q9UKI2 NEAT1-202ENST00000501122 22743 ntBASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 RNU6-179P-201ENST00000363350 107 ntBASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 Y_RNA.259-201ENST00000364619 101 ntBASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 SNORD115-7-201ENST00000365306 82 ntBASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 SNORA62-201ENST00000365493 153 ntBASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 Y_RNA.373-201ENST00000365600 103 ntBASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 Y_RNA.414-201ENST00000384011 101 ntBASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 RNU6-738P-201ENST00000384531 106 ntBASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 AL078599.1-201ENST00000402075 293 ntBASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 RNA5SP107-201ENST00000411358 122 ntBASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 COX6B1P1-201ENST00000415962 213 ntBASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 AL590139.1-201ENST00000416267 400 ntBASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 RPS12P5-201ENST00000423449 371 ntBASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 AL359265.2-201ENST00000434367 631 ntBASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 RNU6-1208P-201ENST00000459588 107 ntBASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 AC009127.1-201ENST00000467090 155 ntBASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 AP001804.3-201ENST00000525146 880 ntBASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 AC137627.1-201ENST00000545761 289 ntBASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms