Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CCNL1Q9UK58 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CCNL1Q9UK58 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCNL1Q9UK58 AC097504.1-201ENST00000515103 2415 ntBASIC4.6□□□□□ -1.67
CCNL1Q9UK58 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCNL1Q9UK58 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.6□□□□□ -1.67
CCNL1Q9UK58 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.6□□□□□ -1.67
CCNL1Q9UK58 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CCNL1Q9UK58 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CCNL1Q9UK58 TMSB4XP8-201ENST00000402089 135 ntBASIC4.6□□□□□ -1.67
CCNL1Q9UK58 TMSB4XP6-201ENST00000415187 135 ntBASIC4.6□□□□□ -1.67
CCNL1Q9UK58 AC093698.1-201ENST00000423843 571 ntBASIC4.6□□□□□ -1.67
CCNL1Q9UK58 TMSB4XP1-201ENST00000424567 135 ntBASIC4.6□□□□□ -1.67
CCNL1Q9UK58 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.6□□□□□ -1.67
CCNL1Q9UK58 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.6□□□□□ -1.67
CCNL1Q9UK58 AC005008.1-201ENST00000456151 612 ntBASIC4.6□□□□□ -1.67
CCNL1Q9UK58 U3.44-201ENST00000458938 192 ntBASIC4.6□□□□□ -1.67
CCNL1Q9UK58 RNA5SP103-201ENST00000459503 118 ntBASIC4.6□□□□□ -1.67
CCNL1Q9UK58 AC093663.1-201ENST00000497190 394 ntBASIC4.6□□□□□ -1.67
CCNL1Q9UK58 AC109927.2-201ENST00000506416 303 ntBASIC4.6□□□□□ -1.67
CCNL1Q9UK58 AC090071.1-201ENST00000507713 644 ntBASIC4.6□□□□□ -1.67
CCNL1Q9UK58 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.6□□□□□ -1.67
CCNL1Q9UK58 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCNL1Q9UK58 AC023141.12-201ENST00000512399 199 ntBASIC4.6□□□□□ -1.67
CCNL1Q9UK58 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCNL1Q9UK58 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.6□□□□□ -1.67
CCNL1Q9UK58 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.6□□□□□ -1.67
CCNL1Q9UK58 SNORD39.3-201ENST00000584451 71 ntBASIC4.6□□□□□ -1.67
CCNL1Q9UK58 AC006363.1-201ENST00000603806 463 ntBASIC4.6□□□□□ -1.67
CCNL1Q9UK58 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCNL1Q9UK58 NDUFA8P1-201ENST00000605525 367 ntBASIC4.6□□□□□ -1.67
CCNL1Q9UK58 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.6□□□□□ -1.67
CCNL1Q9UK58 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.6□□□□□ -1.67
CCNL1Q9UK58 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CCNL1Q9UK58 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCNL1Q9UK58 AC019072.1-201ENST00000604535 1551 ntBASIC4.6□□□□□ -1.67
CCNL1Q9UK58 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CCNL1Q9UK58 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.6□□□□□ -1.67
CCNL1Q9UK58 SCN1A-220ENST00000641603 12506 ntBASIC4.59□□□□□ -1.67
CCNL1Q9UK58 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
CCNL1Q9UK58 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCNL1Q9UK58 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CCNL1Q9UK58 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CCNL1Q9UK58 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCNL1Q9UK58 PRRC2CP1-201ENST00000404428 159 ntBASIC4.59□□□□□ -1.67
CCNL1Q9UK58 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.59□□□□□ -1.67
CCNL1Q9UK58 MTCO1P23-201ENST00000415223 1526 ntBASIC4.59□□□□□ -1.67
CCNL1Q9UK58 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.59□□□□□ -1.67
CCNL1Q9UK58 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.59□□□□□ -1.67
CCNL1Q9UK58 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.59□□□□□ -1.67
CCNL1Q9UK58 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.59□□□□□ -1.67
CCNL1Q9UK58 GDI2P1-201ENST00000429312 1336 ntBASIC4.59□□□□□ -1.67
CCNL1Q9UK58 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.59□□□□□ -1.67
CCNL1Q9UK58 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.59□□□□□ -1.67
CCNL1Q9UK58 YWHAZP8-201ENST00000436935 731 ntBASIC4.59□□□□□ -1.67
CCNL1Q9UK58 RPL23AP15-201ENST00000450202 459 ntBASIC4.59□□□□□ -1.67
CCNL1Q9UK58 MTND4P16-201ENST00000466108 1367 ntBASIC4.59□□□□□ -1.67
CCNL1Q9UK58 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.59□□□□□ -1.67
CCNL1Q9UK58 RPS3AP14-201ENST00000483907 780 ntBASIC4.59□□□□□ -1.67
CCNL1Q9UK58 RPL9P33-201ENST00000484311 566 ntBASIC4.59□□□□□ -1.67
CCNL1Q9UK58 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.59□□□□□ -1.67
CCNL1Q9UK58 CDC42P4-201ENST00000510507 563 ntBASIC4.59□□□□□ -1.67
CCNL1Q9UK58 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCNL1Q9UK58 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.59□□□□□ -1.67
CCNL1Q9UK58 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.59□□□□□ -1.67
CCNL1Q9UK58 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.59□□□□□ -1.67
CCNL1Q9UK58 AC090502.2-201ENST00000549267 280 ntBASIC4.59□□□□□ -1.67
CCNL1Q9UK58 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.59□□□□□ -1.67
CCNL1Q9UK58 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.59□□□□□ -1.67
CCNL1Q9UK58 EIF5A2P1-201ENST00000564027 460 ntBASIC4.59□□□□□ -1.67
CCNL1Q9UK58 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.59□□□□□ -1.67
CCNL1Q9UK58 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.59□□□□□ -1.67
CCNL1Q9UK58 MIR5680-201ENST00000577577 84 ntBASIC4.59□□□□□ -1.67
CCNL1Q9UK58 AC027514.1-201ENST00000588561 1603 ntBASIC4.59□□□□□ -1.67
CCNL1Q9UK58 AC010329.2-201ENST00000595195 2737 ntBASIC4.59□□□□□ -1.67
CCNL1Q9UK58 AP000403.1-201ENST00000603349 851 ntBASIC4.59□□□□□ -1.67
CCNL1Q9UK58 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.59□□□□□ -1.67
CCNL1Q9UK58 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.59□□□□□ -1.67
CCNL1Q9UK58 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.59□□□□□ -1.67
CCNL1Q9UK58 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
CCNL1Q9UK58 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CCNL1Q9UK58 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCNL1Q9UK58 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CCNL1Q9UK58 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCNL1Q9UK58 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCNL1Q9UK58 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CCNL1Q9UK58 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCNL1Q9UK58 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCNL1Q9UK58 RPL23AP57-201ENST00000332361 466 ntBASIC4.58□□□□□ -1.68
CCNL1Q9UK58 Y_RNA.97-201ENST00000363094 102 ntBASIC4.58□□□□□ -1.68
CCNL1Q9UK58 RNU6-501P-201ENST00000364072 100 ntBASIC4.58□□□□□ -1.68
CCNL1Q9UK58 RNU6-723P-201ENST00000383973 107 ntBASIC4.58□□□□□ -1.68
CCNL1Q9UK58 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCNL1Q9UK58 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.58□□□□□ -1.68
CCNL1Q9UK58 AC104651.1-201ENST00000427559 735 ntBASIC4.58□□□□□ -1.68
CCNL1Q9UK58 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.58□□□□□ -1.68
CCNL1Q9UK58 AL357520.1-201ENST00000441557 453 ntBASIC4.58□□□□□ -1.68
CCNL1Q9UK58 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.58□□□□□ -1.68
CCNL1Q9UK58 TMED11P-201ENST00000479478 690 ntBASIC4.58□□□□□ -1.68
CCNL1Q9UK58 OR4G11P-201ENST00000492842 939 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms