Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC099489.2-201ENST00000574976 260 ntBASIC4.22□□□□□ -1.73
HDAC6Q9UBN7 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.22□□□□□ -1.73
HDAC6Q9UBN7 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.22□□□□□ -1.73
HDAC6Q9UBN7 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.22□□□□□ -1.73
HDAC6Q9UBN7 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.22□□□□□ -1.73
HDAC6Q9UBN7 AC096577.2-201ENST00000611455 153 ntBASIC4.22□□□□□ -1.73
HDAC6Q9UBN7 AC009318.4-201ENST00000620496 486 ntBASIC4.22□□□□□ -1.73
HDAC6Q9UBN7 U6.105-201ENST00000637379 88 ntBASIC4.22□□□□□ -1.73
HDAC6Q9UBN7 AC006927.3-201ENST00000638789 384 ntBASIC4.22□□□□□ -1.73
HDAC6Q9UBN7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HDAC6Q9UBN7 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HDAC6Q9UBN7 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HDAC6Q9UBN7 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
HDAC6Q9UBN7 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HDAC6Q9UBN7 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.22□□□□□ -1.73
HDAC6Q9UBN7 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.22□□□□□ -1.73
HDAC6Q9UBN7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.21□□□□□ -1.73
HDAC6Q9UBN7 AC021755.1-201ENST00000559747 1447 ntBASIC4.21□□□□□ -1.73
HDAC6Q9UBN7 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.21□□□□□ -1.73
HDAC6Q9UBN7 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 SNORA9-201ENST00000384215 133 ntBASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 EIF5P1-201ENST00000400019 1231 ntBASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 PSMA2P3-201ENST00000429685 675 ntBASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 MTND1P30-201ENST00000441241 901 ntBASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 RPS17P13-201ENST00000448974 407 ntBASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 RNU7-170P-201ENST00000459303 61 ntBASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 MEMO1P3-201ENST00000459811 302 ntBASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 PLGLA-201ENST00000465668 449 ntBASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 LTV1P1-201ENST00000510683 1237 ntBASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 NDUFB4P9-201ENST00000511646 388 ntBASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 RNA5SP164-201ENST00000516533 110 ntBASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 RN7SKP234-201ENST00000517173 224 ntBASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 AC104986.1-201ENST00000517978 436 ntBASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 AL355812.1-201ENST00000603215 216 ntBASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 AL009028.1-201ENST00000604895 802 ntBASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 BRDTP1-201ENST00000605735 677 ntBASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 AC113194.1-201ENST00000606037 500 ntBASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 AC103710.3-201ENST00000608157 948 ntBASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 AC105429.2-201ENST00000610567 517 ntBASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 AC007494.3-201ENST00000624660 743 ntBASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 AC068137.4-201ENST00000638485 296 ntBASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 MTCO1P12-201ENST00000414273 1543 ntBASIC4.21□□□□□ -1.74
HDAC6Q9UBN7 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 RPL23AP57-201ENST00000332361 466 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 Y_RNA.77-201ENST00000362962 107 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 RNU6-328P-201ENST00000390887 106 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 SOD2P1-201ENST00000396543 562 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 AL021407.1-201ENST00000404531 386 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 AC004987.3-201ENST00000413879 771 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 MTND1P20-201ENST00000430341 950 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 AC129850.1-201ENST00000436203 508 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 MTND4P32-201ENST00000437189 1237 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 RPS27AP8-201ENST00000452665 445 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 USP9YP34-201ENST00000453983 808 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 AC087312.1-201ENST00000471411 480 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 AC090453.1-201ENST00000495560 436 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 AC108941.1-201ENST00000502853 530 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 AC093767.1-201ENST00000504523 156 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 AC004069.2-201ENST00000505438 1114 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms