Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 SNORD51-201ENST00000384320 80 ntBASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 RNU6-606P-201ENST00000384721 111 ntBASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 AL136116.1-201ENST00000403591 381 ntBASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 AL162578.1-201ENST00000406202 378 ntBASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 PDCL2P1-201ENST00000419302 352 ntBASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 RPS12P5-201ENST00000423449 371 ntBASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 PSMA2P3-201ENST00000429685 675 ntBASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 RPS20P1-201ENST00000434853 354 ntBASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 DDX3P2-201ENST00000446138 111 ntBASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 AC093278.1-201ENST00000494700 600 ntBASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 HIGD1AP3-201ENST00000515857 278 ntBASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 SUB1P1-201ENST00000524415 382 ntBASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 OR5AL2P-201ENST00000532185 920 ntBASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 GSTP1P1-201ENST00000548078 319 ntBASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 AC079075.1-201ENST00000559543 878 ntBASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 AC093249.4-201ENST00000564755 259 ntBASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 MIR5699-201ENST00000578903 90 ntBASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 MIR4795-201ENST00000584182 89 ntBASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 AL121992.2-201ENST00000606262 256 ntBASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 AL031666.3-201ENST00000609320 1006 ntBASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 AC105429.2-201ENST00000610567 517 ntBASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 AC005858.4-201ENST00000623191 700 ntBASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 SAGE2P-201ENST00000420011 2126 ntBASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 Y_RNA.22-201ENST00000362492 102 ntBASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 RNA5SP191-201ENST00000362585 102 ntBASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 RNU4-48P-201ENST00000365559 182 ntBASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 RNU6-332P-201ENST00000391193 108 ntBASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 RNA5SP113-201ENST00000410486 84 ntBASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 MTCYBP8-201ENST00000422855 651 ntBASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 CKS1BP6-201ENST00000424932 240 ntBASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 TAAR7P-201ENST00000436141 242 ntBASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 AC006480.1-201ENST00000449887 378 ntBASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 RPS5P7-201ENST00000456664 608 ntBASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 RNU7-59P-201ENST00000459101 61 ntBASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 AC068305.1-201ENST00000497406 726 ntBASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 CDH12P4-201ENST00000517835 295 ntBASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 CDH12P3-201ENST00000517935 295 ntBASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 CDH12P1-201ENST00000518435 295 ntBASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 PSMA2P1-201ENST00000526365 646 ntBASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 AP000857.1-201ENST00000532151 543 ntBASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 AC023050.3-201ENST00000541142 333 ntBASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 BNIP3P1-201ENST00000547295 580 ntBASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 AC128657.1-201ENST00000549459 145 ntBASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 AP001029.3-201ENST00000588063 596 ntBASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 AP001429.1-201ENST00000602568 530 ntBASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 AC244100.1-202ENST00000621554 382 ntBASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms