Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.83□□□□□ -1.96
TREX1Q9NSU2 AC095031.1-201ENST00000623685 672 ntBASIC2.83□□□□□ -1.96
TREX1Q9NSU2 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
TREX1Q9NSU2 ASNSP3-201ENST00000451989 1306 ntBASIC2.83□□□□□ -1.96
TREX1Q9NSU2 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TREX1Q9NSU2 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TREX1Q9NSU2 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
TREX1Q9NSU2 AC073346.2-201ENST00000624724 2058 ntBASIC2.83□□□□□ -1.96
TREX1Q9NSU2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
TREX1Q9NSU2 AC233263.6-201ENST00000631132 1963 ntBASIC2.82□□□□□ -1.96
TREX1Q9NSU2 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
TREX1Q9NSU2 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.82□□□□□ -1.96
TREX1Q9NSU2 RNU6-792P-201ENST00000363490 107 ntBASIC2.82□□□□□ -1.96
TREX1Q9NSU2 U8.9-201ENST00000365667 134 ntBASIC2.82□□□□□ -1.96
TREX1Q9NSU2 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.82□□□□□ -1.96
TREX1Q9NSU2 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
TREX1Q9NSU2 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.82□□□□□ -1.96
TREX1Q9NSU2 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
TREX1Q9NSU2 SNORA26.7-201ENST00000391288 122 ntBASIC2.82□□□□□ -1.96
TREX1Q9NSU2 RNA5SP56-201ENST00000410277 118 ntBASIC2.82□□□□□ -1.96
TREX1Q9NSU2 RN7SKP123-201ENST00000410732 291 ntBASIC2.82□□□□□ -1.96
TREX1Q9NSU2 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.82□□□□□ -1.96
TREX1Q9NSU2 KRR1P1-201ENST00000419430 803 ntBASIC2.82□□□□□ -1.96
TREX1Q9NSU2 RPL21P32-201ENST00000419877 477 ntBASIC2.82□□□□□ -1.96
TREX1Q9NSU2 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.82□□□□□ -1.96
TREX1Q9NSU2 RSL24D1P3-201ENST00000449255 495 ntBASIC2.82□□□□□ -1.96
TREX1Q9NSU2 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.82□□□□□ -1.96
TREX1Q9NSU2 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.82□□□□□ -1.96
TREX1Q9NSU2 RPS29P12-201ENST00000460178 152 ntBASIC2.82□□□□□ -1.96
TREX1Q9NSU2 RPL21P47-201ENST00000483696 477 ntBASIC2.82□□□□□ -1.96
TREX1Q9NSU2 MTCO3P44-201ENST00000510977 541 ntBASIC2.82□□□□□ -1.96
TREX1Q9NSU2 RNU6-416P-201ENST00000516265 103 ntBASIC2.82□□□□□ -1.96
TREX1Q9NSU2 OR4A45P-201ENST00000529954 901 ntBASIC2.82□□□□□ -1.96
TREX1Q9NSU2 HPRT1P3-201ENST00000539521 576 ntBASIC2.82□□□□□ -1.96
TREX1Q9NSU2 AC006504.3-201ENST00000586818 523 ntBASIC2.82□□□□□ -1.96
TREX1Q9NSU2 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.82□□□□□ -1.96
TREX1Q9NSU2 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.82□□□□□ -1.96
TREX1Q9NSU2 AC024153.1-201ENST00000603103 365 ntBASIC2.82□□□□□ -1.96
TREX1Q9NSU2 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.82□□□□□ -1.96
TREX1Q9NSU2 AC084035.1-201ENST00000634543 607 ntBASIC2.82□□□□□ -1.96
TREX1Q9NSU2 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
TREX1Q9NSU2 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
TREX1Q9NSU2 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
TREX1Q9NSU2 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TREX1Q9NSU2 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TREX1Q9NSU2 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.81□□□□□ -1.96
TREX1Q9NSU2 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TREX1Q9NSU2 RNU6-799P-201ENST00000363567 107 ntBASIC2.81□□□□□ -1.96
TREX1Q9NSU2 RNU6-481P-201ENST00000384194 107 ntBASIC2.81□□□□□ -1.96
TREX1Q9NSU2 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
TREX1Q9NSU2 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
TREX1Q9NSU2 AC246680.2-201ENST00000422106 389 ntBASIC2.81□□□□□ -1.96
TREX1Q9NSU2 RPL35AP12-201ENST00000425362 338 ntBASIC2.81□□□□□ -1.96
TREX1Q9NSU2 AL009174.1-201ENST00000426577 416 ntBASIC2.81□□□□□ -1.96
TREX1Q9NSU2 AC109583.1-201ENST00000432156 268 ntBASIC2.81□□□□□ -1.96
TREX1Q9NSU2 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.81□□□□□ -1.96
TREX1Q9NSU2 AL512661.1-201ENST00000434586 1253 ntBASIC2.81□□□□□ -1.96
TREX1Q9NSU2 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.81□□□□□ -1.96
TREX1Q9NSU2 GAPDHP27-201ENST00000447427 1020 ntBASIC2.81□□□□□ -1.96
TREX1Q9NSU2 AL500527.1-201ENST00000448532 255 ntBASIC2.81□□□□□ -1.96
TREX1Q9NSU2 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.81□□□□□ -1.96
TREX1Q9NSU2 AC117522.3-201ENST00000507974 584 ntBASIC2.81□□□□□ -1.96
TREX1Q9NSU2 AC025768.1-201ENST00000510057 267 ntBASIC2.81□□□□□ -1.96
TREX1Q9NSU2 RNA5SP76-201ENST00000516277 87 ntBASIC2.81□□□□□ -1.96
TREX1Q9NSU2 OR8K4P-201ENST00000534608 872 ntBASIC2.81□□□□□ -1.96
TREX1Q9NSU2 AL391156.1-201ENST00000554965 554 ntBASIC2.81□□□□□ -1.96
TREX1Q9NSU2 MIR3605-201ENST00000583214 100 ntBASIC2.81□□□□□ -1.96
TREX1Q9NSU2 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.81□□□□□ -1.96
TREX1Q9NSU2 VN1R9P-201ENST00000614184 867 ntBASIC2.81□□□□□ -1.96
TREX1Q9NSU2 AC097372.4-201ENST00000625025 466 ntBASIC2.81□□□□□ -1.96
TREX1Q9NSU2 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TREX1Q9NSU2 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
TREX1Q9NSU2 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.81□□□□□ -1.96
TREX1Q9NSU2 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.81□□□□□ -1.96
TREX1Q9NSU2 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
TREX1Q9NSU2 AC093010.3-201ENST00000570269 15214 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TREX1Q9NSU2 OR5H2-201ENST00000355273 945 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
TREX1Q9NSU2 MIR26A1-201ENST00000362205 77 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 UBA52P6-201ENST00000399822 382 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 SNORA11.1-201ENST00000408133 129 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 SNORD88.1-201ENST00000408684 91 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 AL024507.1-201ENST00000412741 274 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 AL158050.1-201ENST00000416077 457 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 SSXP9-201ENST00000417503 292 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 FAM204CP-201ENST00000424489 642 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 AL390023.1-201ENST00000428836 262 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 AC022018.1-201ENST00000430685 241 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.8□□□□□ -1.96
TREX1Q9NSU2 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.8□□□□□ -1.96
TREX1Q9NSU2 MTCYBP34-201ENST00000439552 670 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC2.8□□□□□ -1.96
TREX1Q9NSU2 S100A11P2-201ENST00000467589 312 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC2.8□□□□□ -1.96
TREX1Q9NSU2 RPS4XP6-201ENST00000477670 797 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 AP001025.2-201ENST00000490908 477 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 CAB39P1-201ENST00000502277 460 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 AC011352.3-201ENST00000505162 593 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms