Protein–RNA interactions for Protein: Q9NP61

ARFGAP3, ADP-ribosylation factor GTPase-activating protein 3, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP3Q9NP61 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 AC006504.1-201ENST00000562493 3666 ntBASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 MTND4P4-201ENST00000439033 1366 ntBASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 SNORA31-201ENST00000362607 130 ntBASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 RNY4P24-201ENST00000362735 96 ntBASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 Y_RNA.77-201ENST00000362962 107 ntBASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 OR4K11P-201ENST00000431829 904 ntBASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 AL138799.3-201ENST00000438968 350 ntBASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 AL359073.1-201ENST00000448036 403 ntBASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 AP1S2P1-201ENST00000457344 379 ntBASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 RN7SL810P-201ENST00000493031 276 ntBASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 AC002456.2-201ENST00000509356 380 ntBASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 AC021146.1-201ENST00000511202 716 ntBASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 AC091965.2-201ENST00000512324 613 ntBASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 SETP2-201ENST00000553886 926 ntBASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 AC009101.1-201ENST00000568135 242 ntBASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 AC023575.1-201ENST00000580510 358 ntBASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 AP001981.2-201ENST00000603241 418 ntBASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 AC113403.1-201ENST00000604910 193 ntBASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 AL158211.4-201ENST00000606988 584 ntBASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 AC009090.3-201ENST00000616553 565 ntBASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 OR52H1-202ENST00000641796 1061 ntBASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ARFGAP3Q9NP61 USP8P1-201ENST00000494673 3183 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 MTND5P33-201ENST00000571250 1450 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 AC009902.3-201ENST00000606235 2172 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 RNU6-1078P-201ENST00000364522 103 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 RNU5E-5P-201ENST00000365379 116 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 RNU6-533P-201ENST00000384144 107 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 AC011933.1-201ENST00000413334 321 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 CCDC58P2-201ENST00000417131 366 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 MTCO2P16-201ENST00000436962 677 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 RPS17P13-201ENST00000448974 407 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 AC098824.1-201ENST00000453565 980 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 AC007967.1-201ENST00000455422 1159 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 AC116533.1-201ENST00000459748 321 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 AC109327.1-201ENST00000471666 403 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 RPL31P13-201ENST00000484151 370 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 CEACAMP10-202ENST00000495431 496 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 AC004069.2-201ENST00000505438 1114 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 AC026726.1-201ENST00000512859 601 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 Y_RNA.695-201ENST00000516715 107 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 AC103783.1-201ENST00000520506 373 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 AC012414.6-201ENST00000568241 401 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 MIR5697-201ENST00000578045 78 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 NBR2-204ENST00000587322 63 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 AC020910.2-201ENST00000603635 610 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 AC068276.1-201ENST00000605793 379 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 AC239868.4-201ENST00000608318 671 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 AC083809.1-201ENST00000615051 472 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 AL713922.2-201ENST00000619384 716 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 AC011460.1-201ENST00000636268 1834 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 UBE3AP2-201ENST00000429033 2259 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 AL158163.1-201ENST00000603915 1649 ntBASIC4.32□□□□□ -1.72
ARFGAP3Q9NP61 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
ARFGAP3Q9NP61 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ARFGAP3Q9NP61 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
ARFGAP3Q9NP61 SNORA51.2-201ENST00000364595 132 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms