Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 LUZP4P1-201ENST00000415420 344 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.45□□□□□ -1.86
RNF41Q9H4P4 OR4K6P-201ENST00000416478 897 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.45□□□□□ -1.86
RNF41Q9H4P4 RPL31P45-201ENST00000419532 356 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AC008065.1-201ENST00000428525 348 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.45□□□□□ -1.86
RNF41Q9H4P4 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.45□□□□□ -1.86
RNF41Q9H4P4 NANOGP2-201ENST00000435391 727 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 RPS26P56-201ENST00000444468 240 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 Z77249.1-201ENST00000444622 1175 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 RN7SL75P-201ENST00000461926 281 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 TMED11P-201ENST00000479478 690 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AC134050.1-201ENST00000495088 933 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 RPL21P131-201ENST00000497298 483 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.45□□□□□ -1.86
RNF41Q9H4P4 RN7SKP234-201ENST00000517173 224 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.45□□□□□ -1.86
RNF41Q9H4P4 FAM60DP-201ENST00000524174 632 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AC034105.3-201ENST00000565294 442 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.45□□□□□ -1.86
RNF41Q9H4P4 MTND3P13-201ENST00000574391 343 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AC022069.1-201ENST00000582910 658 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AC015688.2-201ENST00000584523 262 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AC007566.2-201ENST00000603642 413 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AP003973.1-201ENST00000604639 691 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AC105148.1-201ENST00000604961 409 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 HSPE1P14-201ENST00000605812 302 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.45□□□□□ -1.86
RNF41Q9H4P4 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AC027449.1-201ENST00000608890 407 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AC105429.2-201ENST00000610567 517 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AC135507.2-201ENST00000612443 309 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AL050303.3-201ENST00000613704 284 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AC006065.5-201ENST00000623427 349 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AL078595.3-201ENST00000623815 1166 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AL353746.1-201ENST00000566293 6881 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 AC092326.2-201ENST00000624772 1561 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
RNF41Q9H4P4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RNF41Q9H4P4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.44□□□□□ -1.86
RNF41Q9H4P4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
RNF41Q9H4P4 AP001148.1-201ENST00000624124 2359 ntBASIC3.44□□□□□ -1.86
RNF41Q9H4P4 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
RNF41Q9H4P4 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
RNF41Q9H4P4 AP005901.5-201ENST00000545779 1796 ntBASIC3.44□□□□□ -1.86
RNF41Q9H4P4 snoZ40.1-201ENST00000364540 72 ntBASIC3.44□□□□□ -1.86
RNF41Q9H4P4 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
RNF41Q9H4P4 RNU6-921P-201ENST00000384361 107 ntBASIC3.44□□□□□ -1.86
RNF41Q9H4P4 RNU4-22P-201ENST00000411058 166 ntBASIC3.44□□□□□ -1.86
RNF41Q9H4P4 Z92545.1-201ENST00000411782 234 ntBASIC3.44□□□□□ -1.86
RNF41Q9H4P4 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.44□□□□□ -1.86
RNF41Q9H4P4 RPL7P44-201ENST00000424827 742 ntBASIC3.44□□□□□ -1.86
RNF41Q9H4P4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.44□□□□□ -1.86
RNF41Q9H4P4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.44□□□□□ -1.86
RNF41Q9H4P4 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.44□□□□□ -1.86
RNF41Q9H4P4 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.44□□□□□ -1.86
RNF41Q9H4P4 AL606517.1-201ENST00000446914 387 ntBASIC3.44□□□□□ -1.86
RNF41Q9H4P4 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RNF41Q9H4P4 AC087879.1-201ENST00000474343 374 ntBASIC3.44□□□□□ -1.86
RNF41Q9H4P4 RPL21P103-201ENST00000479921 488 ntBASIC3.44□□□□□ -1.86
RNF41Q9H4P4 SNX5P1-201ENST00000505757 1041 ntBASIC3.44□□□□□ -1.86
RNF41Q9H4P4 MTND2P32-201ENST00000521584 1038 ntBASIC3.44□□□□□ -1.86
RNF41Q9H4P4 OR10V3P-201ENST00000525712 725 ntBASIC3.44□□□□□ -1.86
RNF41Q9H4P4 HIGD1AP10-201ENST00000527837 282 ntBASIC3.44□□□□□ -1.86
RNF41Q9H4P4 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.44□□□□□ -1.86
RNF41Q9H4P4 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.44□□□□□ -1.86
RNF41Q9H4P4 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.44□□□□□ -1.86
RNF41Q9H4P4 MTCYBP23-201ENST00000558717 1102 ntBASIC3.44□□□□□ -1.86
RNF41Q9H4P4 MIR4504-201ENST00000577413 92 ntBASIC3.44□□□□□ -1.86
RNF41Q9H4P4 SNORD39.3-201ENST00000584451 71 ntBASIC3.44□□□□□ -1.86
RNF41Q9H4P4 AL451007.1-201ENST00000595491 289 ntBASIC3.44□□□□□ -1.86
RNF41Q9H4P4 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.44□□□□□ -1.86
RNF41Q9H4P4 AL035411.2-201ENST00000604022 421 ntBASIC3.44□□□□□ -1.86
RNF41Q9H4P4 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.44□□□□□ -1.86
RNF41Q9H4P4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.44□□□□□ -1.86
RNF41Q9H4P4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.44□□□□□ -1.86
RNF41Q9H4P4 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RNF41Q9H4P4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RNF41Q9H4P4 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.44□□□□□ -1.86
RNF41Q9H4P4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RNF41Q9H4P4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.43□□□□□ -1.86
RNF41Q9H4P4 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
RNF41Q9H4P4 AC091152.2-201ENST00000591628 2569 ntBASIC3.43□□□□□ -1.86
RNF41Q9H4P4 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RNF41Q9H4P4 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
RNF41Q9H4P4 RNU6-115P-201ENST00000364310 107 ntBASIC3.43□□□□□ -1.86
RNF41Q9H4P4 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.43□□□□□ -1.86
RNF41Q9H4P4 BOLA3P4-201ENST00000418151 400 ntBASIC3.43□□□□□ -1.86
RNF41Q9H4P4 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.43□□□□□ -1.86
RNF41Q9H4P4 AL139132.1-201ENST00000431587 344 ntBASIC3.43□□□□□ -1.86
RNF41Q9H4P4 AC005345.1-201ENST00000431868 217 ntBASIC3.43□□□□□ -1.86
RNF41Q9H4P4 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms