Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 SNORA70H-201ENST00000383910 135 ntBASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 SNORA70J-201ENST00000384182 135 ntBASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 RNU1-106P-201ENST00000384382 164 ntBASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 SNORA16.2-201ENST00000390991 127 ntBASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 RPL30P2-201ENST00000414021 291 ntBASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 AL358176.3-201ENST00000420757 454 ntBASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 PSMA2P3-201ENST00000429685 675 ntBASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 HMGB3P24-201ENST00000433260 622 ntBASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 TDGF1P1-201ENST00000445734 527 ntBASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 RNU7-167P-201ENST00000459160 62 ntBASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 AC104164.1-201ENST00000460282 590 ntBASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 RPL23AP64-201ENST00000469465 435 ntBASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 PPP1R11P1-201ENST00000486095 376 ntBASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 AC020890.1-201ENST00000491837 504 ntBASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 AL139099.1-201ENST00000497398 403 ntBASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 AC006023.2-201ENST00000609916 167 ntBASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 AL118522.2-201ENST00000616045 615 ntBASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 AP002799.1-201ENST00000623552 423 ntBASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 AC006484.1-201ENST00000435086 1884 ntBASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 AC090740.1-201ENST00000623193 2262 ntBASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 RN7SKP128-201ENST00000364270 303 ntBASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 Y_RNA.383-201ENST00000383855 97 ntBASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 RNU6-1293P-201ENST00000384077 107 ntBASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 RPL35AP3-201ENST00000414680 288 ntBASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 AL353997.1-201ENST00000432936 108 ntBASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 AL645568.3-201ENST00000433683 316 ntBASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 CRYGGP-201ENST00000443337 145 ntBASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 RNU7-169P-201ENST00000459456 61 ntBASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 AC087477.1-201ENST00000465747 340 ntBASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 RPL7P23-201ENST00000493874 747 ntBASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 AC008897.1-201ENST00000494006 347 ntBASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 AP001086.1-201ENST00000494882 321 ntBASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 RPL7P47-201ENST00000497299 556 ntBASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 RNU6-919P-201ENST00000516731 104 ntBASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 Y_RNA.713-201ENST00000517013 96 ntBASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 AL358913.1-201ENST00000554342 121 ntBASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 PARP1P2-201ENST00000556806 195 ntBASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 AC209154.1-201ENST00000582156 337 ntBASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 RNU6-156P-201ENST00000621869 107 ntBASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 AL445437.1-201ENST00000623157 3087 ntBASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 AL606537.1-201ENST00000607258 2011 ntBASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP3Q9BZ76 AC011504.1-201ENST00000623331 4103 ntBASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 AC140479.2-201ENST00000421567 3130 ntBASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 AC007938.2-201ENST00000604666 2634 ntBASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 AC012254.3-201ENST00000591183 2117 ntBASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 AL138713.1-201ENST00000624026 2130 ntBASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 GNL2P1-201ENST00000451274 2190 ntBASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 Y_RNA.16-201ENST00000362421 102 ntBASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 Y_RNA.240-201ENST00000364469 95 ntBASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 RNA5SP479-201ENST00000364858 117 ntBASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 SNORD115-46-201ENST00000390982 71 ntBASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 SNORD70.1-201ENST00000391007 85 ntBASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 AP003170.5-201ENST00000397185 335 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms