Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 snoU109.1-201ENST00000459339 135 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 AC006511.1-201ENST00000470614 315 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 AC108941.1-201ENST00000502853 530 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 RPL7L1P13-201ENST00000511702 739 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.65□□□□□ -1.67
SALL3Q9BXA9 PAICSP4-201ENST00000517543 1253 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.65□□□□□ -1.67
SALL3Q9BXA9 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.65□□□□□ -1.67
SALL3Q9BXA9 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.65□□□□□ -1.67
SALL3Q9BXA9 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.65□□□□□ -1.67
SALL3Q9BXA9 AC138915.2-201ENST00000569776 97 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.65□□□□□ -1.67
SALL3Q9BXA9 AL354760.1-201ENST00000608357 643 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
SALL3Q9BXA9 AC002553.4-201ENST00000616896 331 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.65□□□□□ -1.67
SALL3Q9BXA9 AC018926.3-201ENST00000618841 406 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 CDRT1-208ENST00000630868 794 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 AC099654.10-201ENST00000640395 161 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SALL3Q9BXA9 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SALL3Q9BXA9 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.65□□□□□ -1.67
SALL3Q9BXA9 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SALL3Q9BXA9 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.64□□□□□ -1.67
SALL3Q9BXA9 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.64□□□□□ -1.67
SALL3Q9BXA9 FAM35DP-201ENST00000323387 2712 ntBASIC4.64□□□□□ -1.67
SALL3Q9BXA9 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.64□□□□□ -1.67
SALL3Q9BXA9 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
SALL3Q9BXA9 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SALL3Q9BXA9 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SALL3Q9BXA9 Y_RNA.70-201ENST00000362886 110 ntBASIC4.64□□□□□ -1.67
SALL3Q9BXA9 RNU6-582P-201ENST00000362989 107 ntBASIC4.64□□□□□ -1.67
SALL3Q9BXA9 RN7SKP280-201ENST00000364196 304 ntBASIC4.64□□□□□ -1.67
SALL3Q9BXA9 RNU4-76P-201ENST00000364509 141 ntBASIC4.64□□□□□ -1.67
SALL3Q9BXA9 RNU5E-5P-201ENST00000365379 116 ntBASIC4.64□□□□□ -1.67
SALL3Q9BXA9 SNORA40.3-201ENST00000390964 122 ntBASIC4.64□□□□□ -1.67
SALL3Q9BXA9 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SALL3Q9BXA9 RPL23AP29-201ENST00000397284 453 ntBASIC4.64□□□□□ -1.67
SALL3Q9BXA9 AC025750.1-201ENST00000399891 379 ntBASIC4.64□□□□□ -1.67
SALL3Q9BXA9 AL590290.1-201ENST00000405336 380 ntBASIC4.64□□□□□ -1.67
SALL3Q9BXA9 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.64□□□□□ -1.67
SALL3Q9BXA9 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.64□□□□□ -1.67
SALL3Q9BXA9 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.64□□□□□ -1.67
SALL3Q9BXA9 AL139247.1-201ENST00000422768 325 ntBASIC4.64□□□□□ -1.67
SALL3Q9BXA9 RPS27AP14-201ENST00000422868 454 ntBASIC4.64□□□□□ -1.67
SALL3Q9BXA9 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.64□□□□□ -1.67
SALL3Q9BXA9 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.64□□□□□ -1.67
SALL3Q9BXA9 HMGB3P9-201ENST00000441799 583 ntBASIC4.64□□□□□ -1.67
SALL3Q9BXA9 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.64□□□□□ -1.67
SALL3Q9BXA9 Z95327.1-201ENST00000446082 482 ntBASIC4.64□□□□□ -1.67
SALL3Q9BXA9 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.64□□□□□ -1.67
SALL3Q9BXA9 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.64□□□□□ -1.67
SALL3Q9BXA9 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.64□□□□□ -1.67
SALL3Q9BXA9 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.64□□□□□ -1.67
SALL3Q9BXA9 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.64□□□□□ -1.67
SALL3Q9BXA9 SUMO2P20-201ENST00000520803 283 ntBASIC4.64□□□□□ -1.67
SALL3Q9BXA9 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.64□□□□□ -1.67
SALL3Q9BXA9 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.64□□□□□ -1.67
SALL3Q9BXA9 AC068790.5-201ENST00000602741 355 ntBASIC4.64□□□□□ -1.67
SALL3Q9BXA9 AC112187.2-201ENST00000604345 283 ntBASIC4.64□□□□□ -1.67
SALL3Q9BXA9 AL365503.1-201ENST00000605247 905 ntBASIC4.64□□□□□ -1.67
SALL3Q9BXA9 AC103710.1-201ENST00000610003 901 ntBASIC4.64□□□□□ -1.67
SALL3Q9BXA9 AC027807.2-201ENST00000616099 408 ntBASIC4.64□□□□□ -1.67
SALL3Q9BXA9 AC131238.1-201ENST00000617135 328 ntBASIC4.64□□□□□ -1.67
SALL3Q9BXA9 AC120349.2-201ENST00000625002 298 ntBASIC4.64□□□□□ -1.67
SALL3Q9BXA9 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.64□□□□□ -1.67
SALL3Q9BXA9 BMS1P21-201ENST00000634565 365 ntBASIC4.64□□□□□ -1.67
SALL3Q9BXA9 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SALL3Q9BXA9 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.64□□□□□ -1.67
SALL3Q9BXA9 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.64□□□□□ -1.67
SALL3Q9BXA9 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SALL3Q9BXA9 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.64□□□□□ -1.67
SALL3Q9BXA9 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SALL3Q9BXA9 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
SALL3Q9BXA9 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
SALL3Q9BXA9 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SALL3Q9BXA9 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.63□□□□□ -1.67
SALL3Q9BXA9 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.63□□□□□ -1.67
SALL3Q9BXA9 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.63□□□□□ -1.67
SALL3Q9BXA9 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.63□□□□□ -1.67
SALL3Q9BXA9 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.63□□□□□ -1.67
SALL3Q9BXA9 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.63□□□□□ -1.67
SALL3Q9BXA9 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SALL3Q9BXA9 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SALL3Q9BXA9 RNU5F-6P-201ENST00000362979 116 ntBASIC4.63□□□□□ -1.67
SALL3Q9BXA9 RNY4P14-201ENST00000363656 96 ntBASIC4.63□□□□□ -1.67
SALL3Q9BXA9 Y_RNA.372-201ENST00000365599 102 ntBASIC4.63□□□□□ -1.67
SALL3Q9BXA9 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SALL3Q9BXA9 RNU6-317P-201ENST00000384031 107 ntBASIC4.63□□□□□ -1.67
SALL3Q9BXA9 MTCYBP36-201ENST00000404146 440 ntBASIC4.63□□□□□ -1.67
SALL3Q9BXA9 Y_RNA.598-201ENST00000410480 95 ntBASIC4.63□□□□□ -1.67
SALL3Q9BXA9 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.63□□□□□ -1.67
SALL3Q9BXA9 OR51A5P-201ENST00000415429 942 ntBASIC4.63□□□□□ -1.67
SALL3Q9BXA9 MTATP6P27-201ENST00000416987 621 ntBASIC4.63□□□□□ -1.67
SALL3Q9BXA9 BOLA3P4-201ENST00000418151 400 ntBASIC4.63□□□□□ -1.67
SALL3Q9BXA9 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.63□□□□□ -1.67
SALL3Q9BXA9 RWDD4P2-201ENST00000426392 563 ntBASIC4.63□□□□□ -1.67
SALL3Q9BXA9 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.63□□□□□ -1.67
SALL3Q9BXA9 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.63□□□□□ -1.67
SALL3Q9BXA9 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms