Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4□□□□□ -1.77
NEK1Q96PY6 AC090616.5-202ENST00000582111 297 ntBASIC4□□□□□ -1.77
NEK1Q96PY6 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4□□□□□ -1.77
NEK1Q96PY6 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4□□□□□ -1.77
NEK1Q96PY6 AC011468.4-201ENST00000603942 409 ntBASIC4□□□□□ -1.77
NEK1Q96PY6 AC025588.2-201ENST00000604851 466 ntBASIC4□□□□□ -1.77
NEK1Q96PY6 AC131235.4-201ENST00000609288 620 ntBASIC4□□□□□ -1.77
NEK1Q96PY6 AC009159.2-201ENST00000617603 606 ntBASIC4□□□□□ -1.77
NEK1Q96PY6 ABBA01000935.2-201ENST00000637477 838 ntBASIC4□□□□□ -1.77
NEK1Q96PY6 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4□□□□□ -1.77
NEK1Q96PY6 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4□□□□□ -1.77
NEK1Q96PY6 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
NEK1Q96PY6 AL021368.2-201ENST00000606125 5352 ntBASIC3.99□□□□□ -1.77
NEK1Q96PY6 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NEK1Q96PY6 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
NEK1Q96PY6 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.99□□□□□ -1.77
NEK1Q96PY6 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NEK1Q96PY6 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NEK1Q96PY6 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NEK1Q96PY6 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.99□□□□□ -1.77
NEK1Q96PY6 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NEK1Q96PY6 TAF9BP1-201ENST00000396646 746 ntBASIC3.99□□□□□ -1.77
NEK1Q96PY6 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NEK1Q96PY6 AP000567.1-201ENST00000406413 156 ntBASIC3.99□□□□□ -1.77
NEK1Q96PY6 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.99□□□□□ -1.77
NEK1Q96PY6 AC097713.2-201ENST00000430199 356 ntBASIC3.99□□□□□ -1.77
NEK1Q96PY6 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.99□□□□□ -1.77
NEK1Q96PY6 RPL21P134-201ENST00000453468 483 ntBASIC3.99□□□□□ -1.77
NEK1Q96PY6 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.99□□□□□ -1.77
NEK1Q96PY6 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.99□□□□□ -1.77
NEK1Q96PY6 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.99□□□□□ -1.77
NEK1Q96PY6 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.99□□□□□ -1.77
NEK1Q96PY6 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.99□□□□□ -1.77
NEK1Q96PY6 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.99□□□□□ -1.77
NEK1Q96PY6 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.99□□□□□ -1.77
NEK1Q96PY6 AC007458.1-201ENST00000542812 373 ntBASIC3.99□□□□□ -1.77
NEK1Q96PY6 AC005476.1-201ENST00000554427 397 ntBASIC3.99□□□□□ -1.77
NEK1Q96PY6 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.99□□□□□ -1.77
NEK1Q96PY6 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.99□□□□□ -1.77
NEK1Q96PY6 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.99□□□□□ -1.77
NEK1Q96PY6 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.99□□□□□ -1.77
NEK1Q96PY6 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.99□□□□□ -1.77
NEK1Q96PY6 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.99□□□□□ -1.77
NEK1Q96PY6 AL355812.1-201ENST00000603215 216 ntBASIC3.99□□□□□ -1.77
NEK1Q96PY6 IGHV3-29-201ENST00000604817 344 ntBASIC3.99□□□□□ -1.77
NEK1Q96PY6 AC080013.3-201ENST00000606839 578 ntBASIC3.99□□□□□ -1.77
NEK1Q96PY6 AL513477.2-201ENST00000607858 568 ntBASIC3.99□□□□□ -1.77
NEK1Q96PY6 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.99□□□□□ -1.77
NEK1Q96PY6 AC097478.2-201ENST00000610572 514 ntBASIC3.99□□□□□ -1.77
NEK1Q96PY6 AC092628.2-201ENST00000622492 339 ntBASIC3.99□□□□□ -1.77
NEK1Q96PY6 AC092184.1-201ENST00000625042 715 ntBASIC3.99□□□□□ -1.77
NEK1Q96PY6 AC116618.1-201ENST00000634617 774 ntBASIC3.99□□□□□ -1.77
NEK1Q96PY6 AC006927.4-201ENST00000639187 543 ntBASIC3.99□□□□□ -1.77
NEK1Q96PY6 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.99□□□□□ -1.77
NEK1Q96PY6 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
NEK1Q96PY6 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
NEK1Q96PY6 ZNF734P-201ENST00000419494 1534 ntBASIC3.99□□□□□ -1.77
NEK1Q96PY6 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NEK1Q96PY6 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
NEK1Q96PY6 CDR1-202ENST00000625883 1485 ntBASIC3.98□□□□□ -1.77
NEK1Q96PY6 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
NEK1Q96PY6 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
NEK1Q96PY6 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
NEK1Q96PY6 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.98□□□□□ -1.77
NEK1Q96PY6 RNU4-28P-201ENST00000364739 141 ntBASIC3.98□□□□□ -1.77
NEK1Q96PY6 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
NEK1Q96PY6 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.98□□□□□ -1.77
NEK1Q96PY6 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
NEK1Q96PY6 AL133384.1-201ENST00000412744 351 ntBASIC3.98□□□□□ -1.77
NEK1Q96PY6 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NEK1Q96PY6 AL008987.1-201ENST00000415528 237 ntBASIC3.98□□□□□ -1.77
NEK1Q96PY6 RPS24P7-201ENST00000416921 246 ntBASIC3.98□□□□□ -1.77
NEK1Q96PY6 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NEK1Q96PY6 NEK4P1-201ENST00000433383 879 ntBASIC3.98□□□□□ -1.77
NEK1Q96PY6 BX679664.1-201ENST00000434429 253 ntBASIC3.98□□□□□ -1.77
NEK1Q96PY6 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.98□□□□□ -1.77
NEK1Q96PY6 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.98□□□□□ -1.77
NEK1Q96PY6 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.98□□□□□ -1.77
NEK1Q96PY6 MTND1P16-201ENST00000465177 898 ntBASIC3.98□□□□□ -1.77
NEK1Q96PY6 AC092757.1-201ENST00000467293 467 ntBASIC3.98□□□□□ -1.77
NEK1Q96PY6 AL136126.1-201ENST00000473603 402 ntBASIC3.98□□□□□ -1.77
NEK1Q96PY6 AC017015.1-201ENST00000477387 286 ntBASIC3.98□□□□□ -1.77
NEK1Q96PY6 RPS29P2-201ENST00000479278 136 ntBASIC3.98□□□□□ -1.77
NEK1Q96PY6 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.98□□□□□ -1.77
NEK1Q96PY6 RN7SKP57-201ENST00000517248 293 ntBASIC3.98□□□□□ -1.77
NEK1Q96PY6 AP001636.2-201ENST00000525517 696 ntBASIC3.98□□□□□ -1.77
NEK1Q96PY6 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.98□□□□□ -1.77
NEK1Q96PY6 AC010198.2-201ENST00000550612 259 ntBASIC3.98□□□□□ -1.77
NEK1Q96PY6 NBEAP1-201ENST00000554452 979 ntBASIC3.98□□□□□ -1.77
NEK1Q96PY6 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.98□□□□□ -1.77
NEK1Q96PY6 AC106782.4-201ENST00000568264 210 ntBASIC3.98□□□□□ -1.77
NEK1Q96PY6 MIR3186-201ENST00000577404 85 ntBASIC3.98□□□□□ -1.77
NEK1Q96PY6 MIR4513-201ENST00000581077 86 ntBASIC3.98□□□□□ -1.77
NEK1Q96PY6 AC090425.2-201ENST00000608818 501 ntBASIC3.98□□□□□ -1.77
NEK1Q96PY6 AP001521.1-201ENST00000609150 300 ntBASIC3.98□□□□□ -1.77
NEK1Q96PY6 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.98□□□□□ -1.77
NEK1Q96PY6 PLCE1P1-201ENST00000622094 305 ntBASIC3.98□□□□□ -1.77
NEK1Q96PY6 AP000676.4-201ENST00000624659 623 ntBASIC3.98□□□□□ -1.77
NEK1Q96PY6 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.98□□□□□ -1.77
NEK1Q96PY6 CR383658.2-201ENST00000547576 1525 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms