Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC004944.1-201ENST00000517807 3059 ntBASIC2.84□□□□□ -1.95
COL21A1Q96P44 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
COL21A1Q96P44 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
COL21A1Q96P44 RNA5SP258-201ENST00000362750 119 ntBASIC2.84□□□□□ -1.95
COL21A1Q96P44 U8.9-201ENST00000365667 134 ntBASIC2.84□□□□□ -1.95
COL21A1Q96P44 RNU6-468P-201ENST00000384003 109 ntBASIC2.84□□□□□ -1.95
COL21A1Q96P44 AL139098.1-201ENST00000407291 389 ntBASIC2.84□□□□□ -1.95
COL21A1Q96P44 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.84□□□□□ -1.95
COL21A1Q96P44 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.84□□□□□ -1.95
COL21A1Q96P44 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.84□□□□□ -1.95
COL21A1Q96P44 AL390023.1-201ENST00000428836 262 ntBASIC2.84□□□□□ -1.95
COL21A1Q96P44 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.84□□□□□ -1.95
COL21A1Q96P44 AC241584.1-201ENST00000438469 1241 ntBASIC2.84□□□□□ -1.95
COL21A1Q96P44 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.84□□□□□ -1.95
COL21A1Q96P44 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.84□□□□□ -1.95
COL21A1Q96P44 snoU13.4-201ENST00000458916 104 ntBASIC2.84□□□□□ -1.95
COL21A1Q96P44 AC017015.1-201ENST00000477387 286 ntBASIC2.84□□□□□ -1.95
COL21A1Q96P44 AL049873.1-201ENST00000480540 376 ntBASIC2.84□□□□□ -1.95
COL21A1Q96P44 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.84□□□□□ -1.95
COL21A1Q96P44 RN7SL633P-201ENST00000488974 297 ntBASIC2.84□□□□□ -1.95
COL21A1Q96P44 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
COL21A1Q96P44 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.84□□□□□ -1.95
COL21A1Q96P44 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.84□□□□□ -1.95
COL21A1Q96P44 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.84□□□□□ -1.95
COL21A1Q96P44 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
COL21A1Q96P44 AL163153.1-201ENST00000554223 283 ntBASIC2.84□□□□□ -1.95
COL21A1Q96P44 AL157394.1-201ENST00000562983 1224 ntBASIC2.84□□□□□ -1.95
COL21A1Q96P44 MIR4789-201ENST00000577469 82 ntBASIC2.84□□□□□ -1.95
COL21A1Q96P44 MIR4474-201ENST00000579189 78 ntBASIC2.84□□□□□ -1.95
COL21A1Q96P44 MIR4666A-201ENST00000580160 79 ntBASIC2.84□□□□□ -1.95
COL21A1Q96P44 AL020997.3-201ENST00000602843 359 ntBASIC2.84□□□□□ -1.95
COL21A1Q96P44 AC124312.4-201ENST00000605533 310 ntBASIC2.84□□□□□ -1.95
COL21A1Q96P44 AL627309.6-201ENST00000606857 840 ntBASIC2.84□□□□□ -1.95
COL21A1Q96P44 AC069234.5-201ENST00000611056 416 ntBASIC2.84□□□□□ -1.95
COL21A1Q96P44 MIR8057-201ENST00000620957 69 ntBASIC2.84□□□□□ -1.95
COL21A1Q96P44 MIR6852-201ENST00000621699 66 ntBASIC2.84□□□□□ -1.95
COL21A1Q96P44 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
COL21A1Q96P44 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.84□□□□□ -1.95
COL21A1Q96P44 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
COL21A1Q96P44 API5P2-201ENST00000397055 1498 ntBASIC2.84□□□□□ -1.96
COL21A1Q96P44 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
COL21A1Q96P44 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
COL21A1Q96P44 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
COL21A1Q96P44 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
COL21A1Q96P44 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
COL21A1Q96P44 RNA5SP374-201ENST00000362939 125 ntBASIC2.83□□□□□ -1.96
COL21A1Q96P44 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
COL21A1Q96P44 DEFB109C-201ENST00000382575 264 ntBASIC2.83□□□□□ -1.96
COL21A1Q96P44 DEFB109B-201ENST00000382656 264 ntBASIC2.83□□□□□ -1.96
COL21A1Q96P44 RNU6-354P-201ENST00000383862 107 ntBASIC2.83□□□□□ -1.96
COL21A1Q96P44 U6.112-201ENST00000384129 70 ntBASIC2.83□□□□□ -1.96
COL21A1Q96P44 RNU6-610P-201ENST00000384264 107 ntBASIC2.83□□□□□ -1.96
COL21A1Q96P44 FNDC3CP-201ENST00000420795 1155 ntBASIC2.83□□□□□ -1.96
COL21A1Q96P44 RPL7P46-201ENST00000425129 740 ntBASIC2.83□□□□□ -1.96
COL21A1Q96P44 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.83□□□□□ -1.96
COL21A1Q96P44 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.83□□□□□ -1.96
COL21A1Q96P44 AL512637.2-201ENST00000431287 1256 ntBASIC2.83□□□□□ -1.96
COL21A1Q96P44 AC234064.1-201ENST00000436312 247 ntBASIC2.83□□□□□ -1.96
COL21A1Q96P44 HMGB1P15-201ENST00000453854 435 ntBASIC2.83□□□□□ -1.96
COL21A1Q96P44 AC010301.1-201ENST00000473936 355 ntBASIC2.83□□□□□ -1.96
COL21A1Q96P44 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.83□□□□□ -1.96
COL21A1Q96P44 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.83□□□□□ -1.96
COL21A1Q96P44 RN7SKP272-201ENST00000516988 232 ntBASIC2.83□□□□□ -1.96
COL21A1Q96P44 RN7SKP57-201ENST00000517248 293 ntBASIC2.83□□□□□ -1.96
COL21A1Q96P44 AC113192.3-201ENST00000529152 742 ntBASIC2.83□□□□□ -1.96
COL21A1Q96P44 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.83□□□□□ -1.96
COL21A1Q96P44 AC093519.1-201ENST00000566109 298 ntBASIC2.83□□□□□ -1.96
COL21A1Q96P44 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.83□□□□□ -1.96
COL21A1Q96P44 AP001029.3-201ENST00000588063 596 ntBASIC2.83□□□□□ -1.96
COL21A1Q96P44 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.83□□□□□ -1.96
COL21A1Q96P44 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
COL21A1Q96P44 VN1R74P-201ENST00000613259 503 ntBASIC2.83□□□□□ -1.96
COL21A1Q96P44 AC107308.1-201ENST00000615897 301 ntBASIC2.83□□□□□ -1.96
COL21A1Q96P44 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.83□□□□□ -1.96
COL21A1Q96P44 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.83□□□□□ -1.96
COL21A1Q96P44 AC073592.7-201ENST00000623659 507 ntBASIC2.83□□□□□ -1.96
COL21A1Q96P44 AL121594.5-201ENST00000631724 573 ntBASIC2.83□□□□□ -1.96
COL21A1Q96P44 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.83□□□□□ -1.96
COL21A1Q96P44 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
COL21A1Q96P44 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.83□□□□□ -1.96
COL21A1Q96P44 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.83□□□□□ -1.96
COL21A1Q96P44 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.83□□□□□ -1.96
COL21A1Q96P44 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
COL21A1Q96P44 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.82□□□□□ -1.96
COL21A1Q96P44 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.82□□□□□ -1.96
COL21A1Q96P44 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
COL21A1Q96P44 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
COL21A1Q96P44 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL21A1Q96P44 MIR22-201ENST00000362190 85 ntBASIC2.82□□□□□ -1.96
COL21A1Q96P44 RNU6-251P-201ENST00000363235 104 ntBASIC2.82□□□□□ -1.96
COL21A1Q96P44 RNU6-1249P-201ENST00000363237 111 ntBASIC2.82□□□□□ -1.96
COL21A1Q96P44 RNU6-263P-201ENST00000363811 107 ntBASIC2.82□□□□□ -1.96
COL21A1Q96P44 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.82□□□□□ -1.96
COL21A1Q96P44 SNORA26.7-201ENST00000391288 122 ntBASIC2.82□□□□□ -1.96
COL21A1Q96P44 AL122016.1-201ENST00000403365 367 ntBASIC2.82□□□□□ -1.96
COL21A1Q96P44 RNU4-78P-201ENST00000410940 126 ntBASIC2.82□□□□□ -1.96
COL21A1Q96P44 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.82□□□□□ -1.96
COL21A1Q96P44 AL139281.1-201ENST00000422120 335 ntBASIC2.82□□□□□ -1.96
COL21A1Q96P44 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.82□□□□□ -1.96
COL21A1Q96P44 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms