Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HPS3Q969F9 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.63□□□□□ -1.67
HPS3Q969F9 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
HPS3Q969F9 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HPS3Q969F9 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HPS3Q969F9 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.62□□□□□ -1.67
HPS3Q969F9 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.62□□□□□ -1.67
HPS3Q969F9 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HPS3Q969F9 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HPS3Q969F9 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HPS3Q969F9 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
HPS3Q969F9 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HPS3Q969F9 RPL7P25-201ENST00000404151 721 ntBASIC4.62□□□□□ -1.67
HPS3Q969F9 RNU2-66P-201ENST00000410650 161 ntBASIC4.62□□□□□ -1.67
HPS3Q969F9 RNU6-248P-201ENST00000410720 107 ntBASIC4.62□□□□□ -1.67
HPS3Q969F9 AL160275.2-201ENST00000412010 394 ntBASIC4.62□□□□□ -1.67
HPS3Q969F9 MTCO1P21-201ENST00000416634 589 ntBASIC4.62□□□□□ -1.67
HPS3Q969F9 COX6B1P7-201ENST00000430845 235 ntBASIC4.62□□□□□ -1.67
HPS3Q969F9 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.62□□□□□ -1.67
HPS3Q969F9 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.62□□□□□ -1.67
HPS3Q969F9 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HPS3Q969F9 AL132765.1-201ENST00000434165 553 ntBASIC4.62□□□□□ -1.67
HPS3Q969F9 MRPS18BP2-201ENST00000434310 759 ntBASIC4.62□□□□□ -1.67
HPS3Q969F9 RABEPKP1-201ENST00000440529 1026 ntBASIC4.62□□□□□ -1.67
HPS3Q969F9 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.62□□□□□ -1.67
HPS3Q969F9 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.62□□□□□ -1.67
HPS3Q969F9 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.62□□□□□ -1.67
HPS3Q969F9 MTND1P9-201ENST00000453775 944 ntBASIC4.62□□□□□ -1.67
HPS3Q969F9 AC025445.1-201ENST00000502728 300 ntBASIC4.62□□□□□ -1.67
HPS3Q969F9 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.62□□□□□ -1.67
HPS3Q969F9 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.62□□□□□ -1.67
HPS3Q969F9 AL592156.1-201ENST00000508758 304 ntBASIC4.62□□□□□ -1.67
HPS3Q969F9 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.62□□□□□ -1.67
HPS3Q969F9 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.62□□□□□ -1.67
HPS3Q969F9 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.62□□□□□ -1.67
HPS3Q969F9 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.62□□□□□ -1.67
HPS3Q969F9 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.62□□□□□ -1.67
HPS3Q969F9 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.62□□□□□ -1.67
HPS3Q969F9 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.62□□□□□ -1.67
HPS3Q969F9 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.62□□□□□ -1.67
HPS3Q969F9 DEFB131E-202ENST00000602581 683 ntBASIC4.62□□□□□ -1.67
HPS3Q969F9 AC010680.3-201ENST00000604215 520 ntBASIC4.62□□□□□ -1.67
HPS3Q969F9 AL031176.1-201ENST00000604554 466 ntBASIC4.62□□□□□ -1.67
HPS3Q969F9 AC090578.1-201ENST00000604955 591 ntBASIC4.62□□□□□ -1.67
HPS3Q969F9 AL590392.1-201ENST00000604960 446 ntBASIC4.62□□□□□ -1.67
HPS3Q969F9 AC012603.1-201ENST00000606424 528 ntBASIC4.62□□□□□ -1.67
HPS3Q969F9 RNU6-87P-201ENST00000607561 108 ntBASIC4.62□□□□□ -1.67
HPS3Q969F9 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.62□□□□□ -1.67
HPS3Q969F9 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.62□□□□□ -1.67
HPS3Q969F9 AC018755.4-201ENST00000619715 454 ntBASIC4.62□□□□□ -1.67
HPS3Q969F9 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
HPS3Q969F9 AC011460.1-201ENST00000636268 1834 ntBASIC4.62□□□□□ -1.67
HPS3Q969F9 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
HPS3Q969F9 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.62□□□□□ -1.67
HPS3Q969F9 MFSD8-242ENST00000641690 4199 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HPS3Q969F9 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HPS3Q969F9 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HPS3Q969F9 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HPS3Q969F9 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HPS3Q969F9 RNA5SP388-201ENST00000362584 119 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 U3.15-201ENST00000365398 212 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 RNA5SP366-201ENST00000365454 123 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HPS3Q969F9 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HPS3Q969F9 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HPS3Q969F9 RNU5A-6P-201ENST00000384136 116 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HPS3Q969F9 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HPS3Q969F9 MRPL42P2-201ENST00000403169 426 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 LAP3P1-201ENST00000403648 294 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 MIR1179-201ENST00000408703 91 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.61□□□□□ -1.67
HPS3Q969F9 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HPS3Q969F9 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HPS3Q969F9 AL353777.1-201ENST00000425552 326 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.61□□□□□ -1.67
HPS3Q969F9 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.61□□□□□ -1.67
HPS3Q969F9 PGBD4P3-201ENST00000440731 581 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 MTND6P13-201ENST00000443510 523 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 RPL17P49-201ENST00000443728 411 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.61□□□□□ -1.67
HPS3Q969F9 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.61□□□□□ -1.67
HPS3Q969F9 AC104308.1-201ENST00000454621 333 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.61□□□□□ -1.67
HPS3Q969F9 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.61□□□□□ -1.67
HPS3Q969F9 SNORD121B-201ENST00000458838 81 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 RPL7P15-201ENST00000461190 712 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 HMGB1P25-201ENST00000468402 607 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.61□□□□□ -1.67
HPS3Q969F9 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.61□□□□□ -1.67
HPS3Q969F9 AC091167.1-201ENST00000492017 396 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.61□□□□□ -1.67
HPS3Q969F9 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.61□□□□□ -1.67
HPS3Q969F9 AC105233.3-201ENST00000531125 744 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 AC063950.1-201ENST00000552036 308 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.61□□□□□ -1.67
HPS3Q969F9 AC009101.1-201ENST00000568135 242 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 AC060771.1-201ENST00000582031 164 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms