Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 RN7SKP27-201ENST00000410684 333 ntBASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 JKAMPP1-201ENST00000413804 919 ntBASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 RPL36AP36-201ENST00000418616 301 ntBASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 AL358934.1-201ENST00000432346 324 ntBASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 AL353093.1-201ENST00000441292 436 ntBASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 SNRPFP4-201ENST00000456366 242 ntBASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 RPL23AP2-201ENST00000471227 466 ntBASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 AC012158.1-204ENST00000483430 465 ntBASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 UBA52P3-201ENST00000491303 382 ntBASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 DYNLL1P6-201ENST00000503440 264 ntBASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 PHBP17-201ENST00000528576 541 ntBASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 OR6C73P-201ENST00000546432 358 ntBASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 AC034105.4-201ENST00000568304 277 ntBASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 AC093227.2-201ENST00000589357 285 ntBASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 AL355816.1-201ENST00000607951 118 ntBASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 AP001506.1-201ENST00000615444 211 ntBASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 AC123768.4-201ENST00000616244 701 ntBASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 AC006504.8-201ENST00000621046 635 ntBASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 AC092162.3-201ENST00000624511 1624 ntBASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 Y_RNA.72-201ENST00000362894 103 ntBASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 Y_RNA.97-201ENST00000363094 102 ntBASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 MIR1179-201ENST00000408703 91 ntBASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 AC093698.1-201ENST00000423843 571 ntBASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 AC018644.1-201ENST00000429934 551 ntBASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 MTND6P18-201ENST00000439477 513 ntBASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 snoU109.1-201ENST00000459339 135 ntBASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 RNU6-277P-201ENST00000516272 106 ntBASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 AP005597.4-201ENST00000526762 229 ntBASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 OR4A45P-201ENST00000529954 901 ntBASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 POLR2KP1-201ENST00000553226 168 ntBASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 AL512360.1-201ENST00000555346 234 ntBASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 AC026470.2-201ENST00000561492 181 ntBASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 AC136618.2-201ENST00000575091 400 ntBASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 MIR5697-201ENST00000578045 78 ntBASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 MIR3668-201ENST00000582138 75 ntBASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 BNIP3P8-201ENST00000597863 560 ntBASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 AC116563.2-201ENST00000624751 535 ntBASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 SEC63P2-201ENST00000503863 1939 ntBASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SH3RF3Q8TEJ3 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SH3RF3Q8TEJ3 USP9YP4-201ENST00000424401 1745 ntBASIC4.94□□□□□ -1.62
SH3RF3Q8TEJ3 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.94□□□□□ -1.62
SH3RF3Q8TEJ3 FAM91A3P-201ENST00000456826 2544 ntBASIC4.94□□□□□ -1.62
SH3RF3Q8TEJ3 MTND5P1-201ENST00000445440 1375 ntBASIC4.94□□□□□ -1.62
SH3RF3Q8TEJ3 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SH3RF3Q8TEJ3 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
SH3RF3Q8TEJ3 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SH3RF3Q8TEJ3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.94□□□□□ -1.62
SH3RF3Q8TEJ3 RNU5D-1-201ENST00000363299 116 ntBASIC4.94□□□□□ -1.62
SH3RF3Q8TEJ3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.94□□□□□ -1.62
SH3RF3Q8TEJ3 RNU6-767P-201ENST00000384132 107 ntBASIC4.94□□□□□ -1.62
SH3RF3Q8TEJ3 RNU6-1103P-201ENST00000384150 107 ntBASIC4.94□□□□□ -1.62
SH3RF3Q8TEJ3 RNU6-1122P-201ENST00000384449 107 ntBASIC4.94□□□□□ -1.62
SH3RF3Q8TEJ3 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SH3RF3Q8TEJ3 RPS3AP36-201ENST00000398190 775 ntBASIC4.94□□□□□ -1.62
SH3RF3Q8TEJ3 RNU2-42P-201ENST00000410697 113 ntBASIC4.94□□□□□ -1.62
SH3RF3Q8TEJ3 RNU4-6P-201ENST00000410804 122 ntBASIC4.94□□□□□ -1.62
SH3RF3Q8TEJ3 HSPE1P12-201ENST00000412576 301 ntBASIC4.94□□□□□ -1.62
SH3RF3Q8TEJ3 RBMY1KP-201ENST00000423480 476 ntBASIC4.94□□□□□ -1.62
SH3RF3Q8TEJ3 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms