Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.25□□□□□ -1.73
CPEB3Q8NE35 ELL2P4-201ENST00000446870 1376 ntBASIC4.25□□□□□ -1.73
CPEB3Q8NE35 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CPEB3Q8NE35 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CPEB3Q8NE35 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.24□□□□□ -1.73
CPEB3Q8NE35 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.24□□□□□ -1.73
CPEB3Q8NE35 Z73965.1-201ENST00000623412 2297 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CPEB3Q8NE35 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CPEB3Q8NE35 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CPEB3Q8NE35 NACAP2-201ENST00000318548 624 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 RNA5SP258-201ENST00000362750 119 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 Y_RNA.255-201ENST00000364581 97 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 MIR550A3-201ENST00000390735 95 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 SSXP10-201ENST00000402595 565 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 AL121834.1-202ENST00000404494 277 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 COX6B1P1-201ENST00000415962 213 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.24□□□□□ -1.73
CPEB3Q8NE35 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.24□□□□□ -1.73
CPEB3Q8NE35 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.24□□□□□ -1.73
CPEB3Q8NE35 AC108734.1-201ENST00000439549 399 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 RPL12P3-201ENST00000440080 396 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 RPL7P52-201ENST00000449200 742 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 AC233279.1-201ENST00000455300 423 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 AL356010.1-201ENST00000456364 102 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 AC093270.2-201ENST00000486157 792 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 AC231760.1-201ENST00000498002 260 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 EIF4EP3-201ENST00000498782 656 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 AC112206.3-201ENST00000514578 389 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.24□□□□□ -1.73
CPEB3Q8NE35 AC107953.1-201ENST00000522216 297 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.24□□□□□ -1.73
CPEB3Q8NE35 AP003497.1-201ENST00000528472 562 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.24□□□□□ -1.73
CPEB3Q8NE35 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.24□□□□□ -1.73
CPEB3Q8NE35 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.24□□□□□ -1.73
CPEB3Q8NE35 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.24□□□□□ -1.73
CPEB3Q8NE35 AC068831.4-201ENST00000556118 109 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 AC079075.1-201ENST00000559543 878 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.24□□□□□ -1.73
CPEB3Q8NE35 AC090615.1-201ENST00000577519 154 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 MIR3934-201ENST00000579806 107 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 AC060771.1-201ENST00000582031 164 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.24□□□□□ -1.73
CPEB3Q8NE35 AC020910.2-201ENST00000603635 610 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 AC020910.3-201ENST00000603701 874 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 AL049539.1-201ENST00000611964 459 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.24□□□□□ -1.73
CPEB3Q8NE35 MIR6864-201ENST00000617935 70 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 AC009248.2-201ENST00000619826 254 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.24□□□□□ -1.73
CPEB3Q8NE35 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.24□□□□□ -1.73
CPEB3Q8NE35 TPTEP1-208ENST00000636884 213 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 MIR1302-1-201ENST00000637932 143 ntBASIC4.24□□□□□ -1.73
CPEB3Q8NE35 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.24□□□□□ -1.73
CPEB3Q8NE35 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.24□□□□□ -1.73
CPEB3Q8NE35 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CPEB3Q8NE35 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CPEB3Q8NE35 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.24□□□□□ -1.73
CPEB3Q8NE35 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.24□□□□□ -1.73
CPEB3Q8NE35 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AC107068.1-201ENST00000563286 4218 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AC011460.1-201ENST00000636268 1834 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 RNU6-97P-201ENST00000363387 104 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 Y_RNA.326-201ENST00000365176 113 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 Y_RNA.419-201ENST00000384041 102 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 RNU6-606P-201ENST00000384721 111 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 U3.20-201ENST00000390909 217 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AC004987.3-201ENST00000413879 771 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AC005534.2-201ENST00000431047 433 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 ATP5JP1-201ENST00000431631 322 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AC006466.1-201ENST00000438721 289 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 MTCYBP6-201ENST00000441810 138 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 NANOGP10-201ENST00000453325 895 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AC104308.1-201ENST00000454621 333 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 snoU13.8-201ENST00000458890 104 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AC078785.3-201ENST00000476607 425 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AC021382.1-201ENST00000483523 359 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 RPS23P1-201ENST00000491662 432 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 RPL38P4-201ENST00000502376 214 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms