Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 MTND4LP22-201ENST00000508209 276 ntBASIC5.84□□□□□ -1.47
SIX5Q8N196 AC022360.1-201ENST00000521058 340 ntBASIC5.84□□□□□ -1.47
SIX5Q8N196 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SIX5Q8N196 AL049779.3-201ENST00000557141 606 ntBASIC5.84□□□□□ -1.47
SIX5Q8N196 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.84□□□□□ -1.47
SIX5Q8N196 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.84□□□□□ -1.47
SIX5Q8N196 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.84□□□□□ -1.47
SIX5Q8N196 AC018462.2-201ENST00000605375 395 ntBASIC5.84□□□□□ -1.47
SIX5Q8N196 AL731566.2-201ENST00000618971 317 ntBASIC5.84□□□□□ -1.47
SIX5Q8N196 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.84□□□□□ -1.47
SIX5Q8N196 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SIX5Q8N196 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SIX5Q8N196 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
SIX5Q8N196 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SIX5Q8N196 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.84□□□□□ -1.48
SIX5Q8N196 AC011755.1-201ENST00000623763 2049 ntBASIC5.84□□□□□ -1.48
SIX5Q8N196 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
SIX5Q8N196 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
SIX5Q8N196 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.83□□□□□ -1.48
SIX5Q8N196 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SIX5Q8N196 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
SIX5Q8N196 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SIX5Q8N196 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
SIX5Q8N196 SAGE2P-201ENST00000420011 2126 ntBASIC5.83□□□□□ -1.48
SIX5Q8N196 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SIX5Q8N196 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.83□□□□□ -1.48
SIX5Q8N196 RNY1P14-201ENST00000384426 108 ntBASIC5.83□□□□□ -1.48
SIX5Q8N196 AL139039.1-201ENST00000401900 692 ntBASIC5.83□□□□□ -1.48
SIX5Q8N196 Y_RNA.594-201ENST00000410373 140 ntBASIC5.83□□□□□ -1.48
SIX5Q8N196 RNU4-6P-201ENST00000410804 122 ntBASIC5.83□□□□□ -1.48
SIX5Q8N196 RN7SKP58-201ENST00000411010 305 ntBASIC5.83□□□□□ -1.48
SIX5Q8N196 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.83□□□□□ -1.48
SIX5Q8N196 RSL24D1P6-201ENST00000426934 401 ntBASIC5.83□□□□□ -1.48
SIX5Q8N196 AC236972.1-201ENST00000433225 199 ntBASIC5.83□□□□□ -1.48
SIX5Q8N196 ELOCP18-201ENST00000434209 337 ntBASIC5.83□□□□□ -1.48
SIX5Q8N196 AL161722.2-201ENST00000434731 981 ntBASIC5.83□□□□□ -1.48
SIX5Q8N196 CYCSP24-201ENST00000445119 316 ntBASIC5.83□□□□□ -1.48
SIX5Q8N196 GEMIN8P3-201ENST00000445417 720 ntBASIC5.83□□□□□ -1.48
SIX5Q8N196 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.83□□□□□ -1.48
SIX5Q8N196 HMGB1P25-201ENST00000468402 607 ntBASIC5.83□□□□□ -1.48
SIX5Q8N196 HIGD1AP3-201ENST00000515857 278 ntBASIC5.83□□□□□ -1.48
SIX5Q8N196 RNU2-69P-201ENST00000516061 100 ntBASIC5.83□□□□□ -1.48
SIX5Q8N196 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.83□□□□□ -1.48
SIX5Q8N196 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.83□□□□□ -1.48
SIX5Q8N196 TCL6_3.1-201ENST00000619064 137 ntBASIC5.83□□□□□ -1.48
SIX5Q8N196 MIR6130-201ENST00000619419 109 ntBASIC5.83□□□□□ -1.48
SIX5Q8N196 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.83□□□□□ -1.48
SIX5Q8N196 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SIX5Q8N196 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
SIX5Q8N196 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
SIX5Q8N196 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.83□□□□□ -1.48
SIX5Q8N196 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.83□□□□□ -1.48
SIX5Q8N196 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SIX5Q8N196 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SIX5Q8N196 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SIX5Q8N196 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.83□□□□□ -1.48
SIX5Q8N196 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.82□□□□□ -1.48
SIX5Q8N196 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.82□□□□□ -1.48
SIX5Q8N196 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SIX5Q8N196 AC092692.1-201ENST00000623625 2595 ntBASIC5.82□□□□□ -1.48
SIX5Q8N196 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
SIX5Q8N196 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.82□□□□□ -1.48
SIX5Q8N196 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.82□□□□□ -1.48
SIX5Q8N196 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SIX5Q8N196 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
SIX5Q8N196 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SIX5Q8N196 Y_RNA.80-201ENST00000362996 102 ntBASIC5.82□□□□□ -1.48
SIX5Q8N196 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SIX5Q8N196 RNU1-106P-201ENST00000384382 164 ntBASIC5.82□□□□□ -1.48
SIX5Q8N196 MT-TG-201ENST00000387429 68 ntBASIC5.82□□□□□ -1.48
SIX5Q8N196 RPS23P10-201ENST00000416185 486 ntBASIC5.82□□□□□ -1.48
SIX5Q8N196 AC099677.1-201ENST00000420575 175 ntBASIC5.82□□□□□ -1.48
SIX5Q8N196 AL590632.1-201ENST00000424289 371 ntBASIC5.82□□□□□ -1.48
SIX5Q8N196 NEFMP1-201ENST00000443423 1006 ntBASIC5.82□□□□□ -1.48
SIX5Q8N196 IGHV5-78-201ENST00000450948 295 ntBASIC5.82□□□□□ -1.48
SIX5Q8N196 AC026782.1-201ENST00000512952 449 ntBASIC5.82□□□□□ -1.48
SIX5Q8N196 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.82□□□□□ -1.48
SIX5Q8N196 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.82□□□□□ -1.48
SIX5Q8N196 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.82□□□□□ -1.48
SIX5Q8N196 Y_RNA.670-201ENST00000516255 105 ntBASIC5.82□□□□□ -1.48
SIX5Q8N196 RNU6-677P-201ENST00000516914 101 ntBASIC5.82□□□□□ -1.48
SIX5Q8N196 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.82□□□□□ -1.48
SIX5Q8N196 AC126177.5-201ENST00000549599 178 ntBASIC5.82□□□□□ -1.48
SIX5Q8N196 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.82□□□□□ -1.48
SIX5Q8N196 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.82□□□□□ -1.48
SIX5Q8N196 IGHV3-29-201ENST00000604817 344 ntBASIC5.82□□□□□ -1.48
SIX5Q8N196 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.82□□□□□ -1.48
SIX5Q8N196 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.82□□□□□ -1.48
SIX5Q8N196 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.82□□□□□ -1.48
SIX5Q8N196 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.82□□□□□ -1.48
SIX5Q8N196 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.82□□□□□ -1.48
SIX5Q8N196 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SIX5Q8N196 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SIX5Q8N196 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
SIX5Q8N196 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SIX5Q8N196 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SIX5Q8N196 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.81□□□□□ -1.48
SIX5Q8N196 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SIX5Q8N196 RNA5SP305-201ENST00000362665 119 ntBASIC5.81□□□□□ -1.48
SIX5Q8N196 RNU6-490P-201ENST00000362985 107 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms