Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 AP000432.2-201ENST00000624164 2048 ntBASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 SNORA63.4-201ENST00000362763 126 ntBASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 SNORD81.1-201ENST00000363064 77 ntBASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 RNA5SP514-201ENST00000363717 111 ntBASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 RNU6-188P-201ENST00000364207 107 ntBASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 Y_RNA.240-201ENST00000364469 95 ntBASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 SNORD116-18-201ENST00000383961 92 ntBASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 RPL19P1-201ENST00000411635 428 ntBASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 OR6D1P-201ENST00000436165 939 ntBASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 AC087385.1-201ENST00000475062 312 ntBASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 AC004453.1-201ENST00000487895 408 ntBASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 RPS23P1-201ENST00000491662 432 ntBASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 SEPT14P8-201ENST00000508026 178 ntBASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 AC126177.5-201ENST00000549599 178 ntBASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 AC112693.2-201ENST00000556538 232 ntBASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 AC000068.2-201ENST00000608816 460 ntBASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 MIR376A1-201ENST00000616574 68 ntBASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 AC008725.1-201ENST00000605123 2263 ntBASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 RNU6-28P-201ENST00000362378 107 ntBASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 Y_RNA.233-201ENST00000364407 101 ntBASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 RNU6-1130P-201ENST00000365434 107 ntBASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 Y_RNA.586-201ENST00000391146 98 ntBASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 AL354766.1-201ENST00000423396 542 ntBASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 RPL37P1-201ENST00000432310 284 ntBASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 AL353597.2-202ENST00000434901 373 ntBASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 AL513124.1-201ENST00000450410 614 ntBASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 RPL23AP81-201ENST00000455252 467 ntBASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 RN7SL809P-201ENST00000482040 297 ntBASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 DUTP1-201ENST00000493631 470 ntBASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 AP001086.1-201ENST00000494882 321 ntBASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 AC068305.1-201ENST00000497406 726 ntBASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 RNU2-10P-201ENST00000516375 211 ntBASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 SULT1C2P2-201ENST00000562517 294 ntBASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 AC007619.2-201ENST00000605743 379 ntBASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS3Q8IXF0 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NPAS3Q8IXF0 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
NPAS3Q8IXF0 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NPAS3Q8IXF0 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms