Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC021678.1-201ENST00000505195 936 ntBASIC4.24□□□□□ -1.73
HERC6Q8IVU3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.24□□□□□ -1.73
HERC6Q8IVU3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.24□□□□□ -1.73
HERC6Q8IVU3 AC022447.3-201ENST00000506865 495 ntBASIC4.24□□□□□ -1.73
HERC6Q8IVU3 GMPSP1-201ENST00000514075 579 ntBASIC4.24□□□□□ -1.73
HERC6Q8IVU3 RNU6-759P-201ENST00000516740 103 ntBASIC4.24□□□□□ -1.73
HERC6Q8IVU3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.24□□□□□ -1.73
HERC6Q8IVU3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HERC6Q8IVU3 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.24□□□□□ -1.73
HERC6Q8IVU3 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.24□□□□□ -1.73
HERC6Q8IVU3 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.24□□□□□ -1.73
HERC6Q8IVU3 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.24□□□□□ -1.73
HERC6Q8IVU3 AL121603.1-201ENST00000553815 142 ntBASIC4.24□□□□□ -1.73
HERC6Q8IVU3 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.24□□□□□ -1.73
HERC6Q8IVU3 PCMTD1P2-201ENST00000565017 355 ntBASIC4.24□□□□□ -1.73
HERC6Q8IVU3 BNIP3P23-201ENST00000599655 511 ntBASIC4.24□□□□□ -1.73
HERC6Q8IVU3 AC026422.1-201ENST00000623961 452 ntBASIC4.24□□□□□ -1.73
HERC6Q8IVU3 AC073530.2-201ENST00000623987 261 ntBASIC4.24□□□□□ -1.73
HERC6Q8IVU3 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HERC6Q8IVU3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.24□□□□□ -1.73
HERC6Q8IVU3 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.24□□□□□ -1.73
HERC6Q8IVU3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HERC6Q8IVU3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 MAPK10-253ENST00000641010 4072 ntBASIC4.23□□□□□ -1.73
HERC6Q8IVU3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 RNU6-335P-201ENST00000364563 113 ntBASIC4.23□□□□□ -1.73
HERC6Q8IVU3 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 RNU6-1181P-201ENST00000384191 106 ntBASIC4.23□□□□□ -1.73
HERC6Q8IVU3 MIR218-2-201ENST00000385006 110 ntBASIC4.23□□□□□ -1.73
HERC6Q8IVU3 AL583834.1-201ENST00000406943 343 ntBASIC4.23□□□□□ -1.73
HERC6Q8IVU3 RNA5SP239-201ENST00000410218 129 ntBASIC4.23□□□□□ -1.73
HERC6Q8IVU3 RNU6-920P-201ENST00000410926 92 ntBASIC4.23□□□□□ -1.73
HERC6Q8IVU3 MTCO1P17-201ENST00000411522 491 ntBASIC4.23□□□□□ -1.73
HERC6Q8IVU3 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 AL390023.1-201ENST00000428836 262 ntBASIC4.23□□□□□ -1.73
HERC6Q8IVU3 SETP8-201ENST00000435341 628 ntBASIC4.23□□□□□ -1.73
HERC6Q8IVU3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 AL445567.1-201ENST00000439121 144 ntBASIC4.23□□□□□ -1.73
HERC6Q8IVU3 ELOCP8-201ENST00000439309 332 ntBASIC4.23□□□□□ -1.73
HERC6Q8IVU3 MTND1P30-201ENST00000441241 901 ntBASIC4.23□□□□□ -1.73
HERC6Q8IVU3 ELOCP15-201ENST00000442090 332 ntBASIC4.23□□□□□ -1.73
HERC6Q8IVU3 Z83846.1-201ENST00000446798 265 ntBASIC4.23□□□□□ -1.73
HERC6Q8IVU3 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 RPS20P32-201ENST00000456044 356 ntBASIC4.23□□□□□ -1.73
HERC6Q8IVU3 AP000926.1-201ENST00000479573 241 ntBASIC4.23□□□□□ -1.73
HERC6Q8IVU3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 AC034222.1-201ENST00000494052 532 ntBASIC4.23□□□□□ -1.73
HERC6Q8IVU3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 AC023141.12-201ENST00000512399 199 ntBASIC4.23□□□□□ -1.73
HERC6Q8IVU3 AC093677.1-201ENST00000514414 678 ntBASIC4.23□□□□□ -1.73
HERC6Q8IVU3 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 AP004247.1-201ENST00000531556 1289 ntBASIC4.23□□□□□ -1.73
HERC6Q8IVU3 SETP7-201ENST00000552169 453 ntBASIC4.23□□□□□ -1.73
HERC6Q8IVU3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 SNRPGP15-201ENST00000600149 222 ntBASIC4.23□□□□□ -1.73
HERC6Q8IVU3 AL031176.1-201ENST00000604554 466 ntBASIC4.23□□□□□ -1.73
HERC6Q8IVU3 AC093783.1-201ENST00000612976 329 ntBASIC4.23□□□□□ -1.73
HERC6Q8IVU3 MIR7844-201ENST00000616161 122 ntBASIC4.23□□□□□ -1.73
HERC6Q8IVU3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 AL365440.1-201ENST00000436135 2167 ntBASIC4.23□□□□□ -1.73
HERC6Q8IVU3 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HERC6Q8IVU3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 RNU6-433P-201ENST00000363216 104 ntBASIC4.22□□□□□ -1.73
HERC6Q8IVU3 PGBD4P8-201ENST00000412993 562 ntBASIC4.22□□□□□ -1.73
HERC6Q8IVU3 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 RPL21P112-201ENST00000434403 463 ntBASIC4.22□□□□□ -1.73
HERC6Q8IVU3 LSM1P1-201ENST00000438629 273 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms