Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 SAGE4P-201ENST00000442271 3381 ntBASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 NACA3P-201ENST00000359690 648 ntBASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 RNU6-374P-201ENST00000364146 108 ntBASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 MIR142-201ENST00000384835 87 ntBASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 MIR491-201ENST00000384877 84 ntBASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 AC073264.1-201ENST00000411508 416 ntBASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 AL024507.1-201ENST00000412741 274 ntBASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 EEF1A1P41-201ENST00000414667 207 ntBASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 LINC01347-201ENST00000417964 355 ntBASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 HSFY1P1-201ENST00000423928 1178 ntBASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 RPL35AP12-201ENST00000425362 338 ntBASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 MTND2P30-201ENST00000456663 382 ntBASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 AC105914.1-201ENST00000511798 226 ntBASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 TBCAP3-201ENST00000512475 312 ntBASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 AC010374.2-201ENST00000512933 535 ntBASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 IGKV2D-36-201ENST00000518643 226 ntBASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 AC138761.3-201ENST00000579993 334 ntBASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 CBX3P2-202ENST00000583365 535 ntBASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 AL133507.1-201ENST00000605269 557 ntBASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.45□□□□□ -2.02
SMARCD3Q6STE5 AC091564.4-201ENST00000533934 2194 ntBASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 AC109315.1-201ENST00000584143 1347 ntBASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 AC006378.2-201ENST00000623178 2476 ntBASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 AC016716.1-201ENST00000265882 708 ntBASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 RNU6-252P-201ENST00000363232 107 ntBASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 RNU6-1180P-201ENST00000364935 107 ntBASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 RNU1-140P-201ENST00000365040 165 ntBASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 RNA5SP210-201ENST00000391034 120 ntBASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 SNORA11.1-201ENST00000408133 129 ntBASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 AL606495.1-201ENST00000422100 813 ntBASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 AC073508.1-201ENST00000428866 656 ntBASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 AC005189.1-201ENST00000431286 310 ntBASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 AL139132.1-201ENST00000431587 344 ntBASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 RPL17P35-201ENST00000432217 549 ntBASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 AC112220.1-201ENST00000434628 355 ntBASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 AL353718.1-201ENST00000451028 517 ntBASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 RNA5SP310-201ENST00000459084 116 ntBASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 AC026427.2-201ENST00000506228 536 ntBASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 SNORA31.13-201ENST00000516624 135 ntBASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 AC233266.2-201ENST00000567067 528 ntBASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 MIR4504-201ENST00000577413 92 ntBASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 MIR4635-201ENST00000583759 79 ntBASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 NUTF2P8-201ENST00000604593 363 ntBASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 AL161756.2-201ENST00000604597 246 ntBASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 BX664608.1-201ENST00000610519 487 ntBASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 AL512506.1-201ENST00000613918 449 ntBASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.44□□□□□ -2.02
SMARCD3Q6STE5 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.43□□□□□ -2.02
SMARCD3Q6STE5 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.43□□□□□ -2.02
SMARCD3Q6STE5 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SMARCD3Q6STE5 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.43□□□□□ -2.02
SMARCD3Q6STE5 SNORA25.6-201ENST00000364121 118 ntBASIC2.43□□□□□ -2.02
SMARCD3Q6STE5 MT-TC-201ENST00000387405 66 ntBASIC2.43□□□□□ -2.02
SMARCD3Q6STE5 TAF9BP2-201ENST00000400856 499 ntBASIC2.43□□□□□ -2.02
SMARCD3Q6STE5 HMGN2P35-201ENST00000412164 270 ntBASIC2.43□□□□□ -2.02
SMARCD3Q6STE5 AL592148.1-201ENST00000413568 445 ntBASIC2.43□□□□□ -2.02
SMARCD3Q6STE5 RPL36P19-201ENST00000430744 301 ntBASIC2.43□□□□□ -2.02
SMARCD3Q6STE5 PTP4A1P3-201ENST00000433661 420 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms