Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 MTND2P23-201ENST00000422990 651 ntBASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 AC236972.2-201ENST00000434979 310 ntBASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 AL356276.2-201ENST00000435919 558 ntBASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 CACYBPP2-201ENST00000453625 678 ntBASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 AC090686.1-201ENST00000481577 749 ntBASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 AC023424.1-201ENST00000496058 459 ntBASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 RNU6-277P-201ENST00000516272 106 ntBASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 AC024224.1-201ENST00000538284 609 ntBASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 AC106785.1-201ENST00000565935 262 ntBASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 CYCSP40-201ENST00000575927 294 ntBASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 MIR3146-201ENST00000580367 79 ntBASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 AL360085.1-201ENST00000604713 532 ntBASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 MTCO1P7-201ENST00000419523 1542 ntBASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 AC020633.1-201ENST00000468439 2247 ntBASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 AP000756.2-201ENST00000624168 2567 ntBASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 AL031595.2-201ENST00000624215 19071 ntBASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 SMG1P6-201ENST00000532337 2930 ntBASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 AC006020.1-201ENST00000420179 1854 ntBASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 ZNF736P3Y-201ENST00000428264 1465 ntBASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 AL136116.1-201ENST00000403591 381 ntBASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 MTND3P8-201ENST00000412909 339 ntBASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 AC006480.1-201ENST00000449887 378 ntBASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 RPL21P129-201ENST00000491732 478 ntBASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 RN7SL558P-201ENST00000497468 299 ntBASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 AC093767.1-201ENST00000504523 156 ntBASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 RNA5SP249-201ENST00000516127 99 ntBASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 RNU6-327P-201ENST00000516270 127 ntBASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 RNU6-1045P-201ENST00000516321 107 ntBASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 AC068993.1-201ENST00000546724 589 ntBASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 AC123786.2-201ENST00000603459 275 ntBASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 AL603758.1-201ENST00000618654 241 ntBASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PRPF40BQ6NWY9 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 AC000374.1-201ENST00000434698 1745 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 AC025031.4-201ENST00000621248 3271 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 RNU6-996P-201ENST00000365438 107 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 RPL32P23-201ENST00000397237 405 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 RN7SKP267-201ENST00000410381 285 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 AC073136.2-201ENST00000417282 849 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 AC012065.2-201ENST00000421295 375 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 OR2AH1P-201ENST00000425717 928 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 OR4F13P-201ENST00000428478 931 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 AL590233.1-201ENST00000430017 456 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 AC092162.1-201ENST00000432828 434 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 IFNA20P-201ENST00000436840 528 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 DDX3P2-201ENST00000446138 111 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 RPL7P52-201ENST00000449200 742 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 AC079168.2-201ENST00000453977 416 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 RN7SL517P-201ENST00000462240 305 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 AC006512.1-201ENST00000468816 291 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 AC015795.1-201ENST00000513669 327 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 AC093677.1-201ENST00000514414 678 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 RPS27AP18-201ENST00000515536 459 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 SCARNA24.1-201ENST00000516465 137 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 SUB1P1-201ENST00000524415 382 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 CYCSP29-201ENST00000533731 318 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 AC090615.1-201ENST00000577519 154 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 AC011477.5-201ENST00000586571 259 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 AC010591.1-201ENST00000603941 649 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 AL133215.3-201ENST00000609801 448 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 ZYXP1-201ENST00000617638 118 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 AC079597.1-201ENST00000624306 508 ntBASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms