Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC114981.1-201ENST00000503897 678 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 FCF1P8-201ENST00000510322 597 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 RNU1-61P-201ENST00000516107 151 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.96□□□□□ -1.94
RAB40BQ12829 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RAB40BQ12829 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.96□□□□□ -1.94
RAB40BQ12829 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.96□□□□□ -1.94
RAB40BQ12829 SETP7-201ENST00000552169 453 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC2.96□□□□□ -1.94
RAB40BQ12829 BNIP3P26-201ENST00000600827 554 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 BNIP3P11-201ENST00000603878 563 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 AC080013.4-201ENST00000607624 649 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 AL157392.4-201ENST00000609756 345 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 AC025588.4-201ENST00000615802 908 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.96□□□□□ -1.94
RAB40BQ12829 AL356585.4-201ENST00000623078 1229 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 AC091903.1-201ENST00000624322 454 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.96□□□□□ -1.94
RAB40BQ12829 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
RAB40BQ12829 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RAB40BQ12829 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
RAB40BQ12829 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RAB40BQ12829 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
RAB40BQ12829 SGO1P2-201ENST00000429458 1589 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 OR4G11P-202ENST00000642116 1414 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 MTND5P24-201ENST00000438892 1767 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
RAB40BQ12829 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.95□□□□□ -1.94
RAB40BQ12829 AC005183.1-201ENST00000603687 1979 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.95□□□□□ -1.94
RAB40BQ12829 SNORA46-201ENST00000384762 135 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 AC025750.1-201ENST00000399891 379 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 DHFRP6-201ENST00000401776 268 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 AL136310.1-201ENST00000404926 654 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.95□□□□□ -1.94
RAB40BQ12829 RNU4-22P-201ENST00000411058 166 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 MTATP6P27-201ENST00000416987 621 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 RPL36AP36-201ENST00000418616 301 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 RPL7P30-201ENST00000420888 709 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.95□□□□□ -1.94
RAB40BQ12829 AL590233.1-201ENST00000430017 456 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 AC007389.2-201ENST00000434630 306 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
RAB40BQ12829 MUPP-201ENST00000438111 566 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.95□□□□□ -1.94
RAB40BQ12829 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.95□□□□□ -1.94
RAB40BQ12829 RPL7P15-201ENST00000461190 712 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.95□□□□□ -1.94
RAB40BQ12829 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RAB40BQ12829 AC020898.1-201ENST00000474167 787 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.95□□□□□ -1.94
RAB40BQ12829 AC114322.1-201ENST00000506771 926 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 AC105914.1-201ENST00000511798 226 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 RNU6-583P-201ENST00000516012 92 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 SNORA31.8-201ENST00000516327 108 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RAB40BQ12829 HSPA8P13-201ENST00000523715 472 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.95□□□□□ -1.94
RAB40BQ12829 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.95□□□□□ -1.94
RAB40BQ12829 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.95□□□□□ -1.94
RAB40BQ12829 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.95□□□□□ -1.94
RAB40BQ12829 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.95□□□□□ -1.94
RAB40BQ12829 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.95□□□□□ -1.94
RAB40BQ12829 AL845331.3-202ENST00000562856 261 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.95□□□□□ -1.94
RAB40BQ12829 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RAB40BQ12829 AC053481.3-201ENST00000577881 843 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 RN7SL339P-201ENST00000580597 296 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.95□□□□□ -1.94
RAB40BQ12829 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.95□□□□□ -1.94
RAB40BQ12829 AC016877.3-201ENST00000606778 504 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.95□□□□□ -1.94
RAB40BQ12829 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.95□□□□□ -1.94
RAB40BQ12829 MIR8058-201ENST00000615737 89 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 AF117829.1-206ENST00000621883 3802 ntBASIC2.95□□□□□ -1.94
RAB40BQ12829 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
RAB40BQ12829 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RAB40BQ12829 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.95□□□□□ -1.94
RAB40BQ12829 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
RAB40BQ12829 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RAB40BQ12829 AC097714.1-201ENST00000511272 1647 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
RAB40BQ12829 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
RAB40BQ12829 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
RAB40BQ12829 RNA5SP119-201ENST00000362715 117 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 RNU6-1155P-201ENST00000363554 107 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 RNU6-560P-201ENST00000364007 108 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
RAB40BQ12829 U8.11-201ENST00000384699 133 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 U8.12-201ENST00000384701 133 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 MIR554-201ENST00000384874 96 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 RNU6ATAC-201ENST00000408749 126 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 RNU4-65P-201ENST00000410473 140 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 RNU2-47P-201ENST00000410649 186 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 RNA5SP229-201ENST00000410809 99 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.94□□□□□ -1.94
RAB40BQ12829 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.94□□□□□ -1.94
RAB40BQ12829 AC007742.1-201ENST00000425789 329 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms